RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CRYBG2Q8N1P7 616 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 CPXM2Q8N436 756 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 C12orf29Q8N999 325 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 XXYLT1Q8NBI6 393 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 RFFLQ8WZ73 363 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 SLC6A18Q96N87 628 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 CDK5RAP1Q96SZ6 601 aaKnown RBP11.48□□□□□ -0.57
DDX41-216ENST00000513562 DCLK3Q9C098 648 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 FAM49BQ9NUQ9 324 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 CLIC5Q9NZA1 410 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 NAGPAQ9UK23 515 aa11.48□□□□□ -0.57
DDX41-216ENST00000513562 SRPRBQ9Y5M8 271 aaKnown RBP11.48□□□□□ -0.57
DDX41-216ENST00000513562 HECTD1Q9ULT8 2610 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 MYO18BQ8IUG5 2567 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 PTPRQQ9UMZ3 2332 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 A0A087X0B3 334 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 A0A1W2PPC4 97 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 YKT6O15498 198 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 ARHGAP6O43182 974 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 PHACTR2O75167 634 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 DNTTP04053 509 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 ITGAVP06756 1048 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 ABCB4P21439 1286 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 EPHA8P29322 1005 aaPredicted RBP11.47□□□□□ -0.57
DDX41-216ENST00000513562 STAT6P42226 847 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 CASP4P49662 377 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 CYP2J2P51589 502 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 COG7P83436 770 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 RHDQ02161 417 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 PDE4CQ08493 712 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 KCNH2Q12809 1159 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 NCOA4Q13772 614 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 TTC31Q49AM3 519 aaPredicted RBP11.47□□□□□ -0.57
DDX41-216ENST00000513562 PKDCCQ504Y2 493 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 PRAMEF14Q5SWL7 426 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 KIAA0895LQ68EN5 471 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 CCDC186Q7Z3E2 898 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 FMNL3Q8IVF7 1028 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 FAM217AQ8IXS0 508 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 EID2Q8N6I1 236 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 ZNF507Q8TCN5 953 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 DDI1Q8WTU0 396 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 JAKMIP2Q96AA8 810 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 ELMO3Q96BJ8 720 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 CLIC6Q96NY7 704 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 HNRNPABQ99729 332 aaKnown RBP11.47□□□□□ -0.57
DDX41-216ENST00000513562 RASAL2Q9UJF2 1139 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 CLIC4Q9Y696 253 aa11.47□□□□□ -0.57
DDX41-216ENST00000513562 NAV2Q8IVL1 2488 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 CLIC2O15247 247 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 CLSTN1O94985 981 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 WNT1P04628 370 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 RALAP11233 206 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 HOXD9P28356 352 aaPredicted RBP11.46□□□□□ -0.57
DDX41-216ENST00000513562 ADORA2BP29275 332 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 HLA-FP30511 346 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 KIF11P52732 1056 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 NDST1P52848 882 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 SNRPFP62306 86 aaKnown RBP11.46□□□□□ -0.57
DDX41-216ENST00000513562 BIRC3Q13489 604 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 FNDC3BQ53EP0 1204 aaKnown RBP11.46□□□□□ -0.57
DDX41-216ENST00000513562 SFMBT2Q5VUG0 894 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 UNC93AQ86WB7 457 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 DENND1CQ8IV53 801 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 ZNF366Q8N895 744 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 DCBLD1Q8N8Z6 715 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 FAM181AQ8N9Y4 354 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 ZNF248Q8NDW4 579 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 PLEKHO2Q8TD55 490 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 WFIKKN2Q8TEU8 576 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 CYB5D2Q8WUJ1 264 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 GOLGA1Q92805 767 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 SKA1Q96BD8 255 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 TMX3Q96JJ7 454 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 LGMNQ99538 433 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 SEMA4CQ9C0C4 833 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 PRSS16Q9NQE7 514 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 PLA2G4CQ9UP65 541 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 CLCA2Q9UQC9 943 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 USP3Q9Y6I4 520 aa11.46□□□□□ -0.57
DDX41-216ENST00000513562 UBE4BO95155 1302 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 A0A1W2PR77 199 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 C10orf142B7Z368 130 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 B8ZZF3 427 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 VNN1O95497 513 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 HMBSP08397 361 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 C6P13671 934 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 P4HA1P13674 534 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 GLDCP23378 1020 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 ARRB1P49407 418 aaPredicted RBP11.45□□□□□ -0.58
DDX41-216ENST00000513562 AP3M2P53677 418 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 UCNP55089 124 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 TMPRSS3P57727 454 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 CLDN10P78369 228 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 INSM1Q01101 510 aaPredicted RBP11.45□□□□□ -0.58
DDX41-216ENST00000513562 KCNC4Q03721 635 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 EFEMP1Q12805 493 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 ZNF776Q68DI1 518 aaPredicted RBP11.45□□□□□ -0.58
DDX41-216ENST00000513562 USP30Q70CQ3 517 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 ADIPOR2Q86V24 386 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms