RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PDGFRBP09619 1106 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 GPD1P21695 349 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 PKNOX1P55347 436 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 FKBP1BP68106 108 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 ARHGAP8P85298 464 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 MAP3K10Q02779 954 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 TMTC4Q5T4D3 741 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 FNIP1Q8TF40 1166 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 SEMA6AQ9H2E6 1030 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 KCTD10Q9H3F6 313 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 CCDC189A1A4V9 331 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 IL18RAPO95256 599 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 CD4P01730 458 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 EIF2S1P05198 315 aaKnown RBP11.54□□□□□ -0.56
TCOF1-211ENST00000513346 PGK2P07205 417 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 JAK1P23458 1154 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 FOXN2P32314 431 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 PTGIRP43119 386 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 RGS7P49802 495 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 CASP5P51878 434 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 HIRAP54198 1017 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-211ENST00000513346 SLC12A3P55017 1021 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 NAA20P61599 178 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 WASHC5Q12768 1159 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 UBAP2LQ14157 1087 aaKnown RBP11.54□□□□□ -0.56
TCOF1-211ENST00000513346 GLB1LQ6UWU2 654 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 SPATA2LQ8IUW3 424 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-211ENST00000513346 DHRSXQ8N5I4 330 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 ARRDC4Q8NCT1 418 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 STN1Q9H668 368 aaKnown RBP11.54□□□□□ -0.56
TCOF1-211ENST00000513346 TAS2R1Q9NYW7 299 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 GPRC5DQ9NZD1 345 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 HACD3Q9P035 362 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 TEKT2Q9UIF3 430 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 V9GYQ6 96 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 WNT10BO00744 389 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 SNX2O60749 519 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 ASMTLO95671 621 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 COX4I1P13073 169 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 NNMTP40261 264 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 CPT1AP50416 773 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 NOGQ13253 232 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 PLEKHH3Q7Z736 793 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 TTC7BQ86TV6 843 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 DHFR2Q86XF0 187 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 ABRAQ8N0Z2 381 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 ZSCAN18Q8TBC5 510 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-211ENST00000513346 IFT43Q96FT9 208 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 MAGEB5Q9BZ81 275 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 SLC17A7Q9P2U7 560 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 TMA7Q9Y2S6 64 aaKnown RBP11.54□□□□□ -0.56
TCOF1-211ENST00000513346 PEAK1Q9H792 1746 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 LSM1O15116 133 aaKnown RBP11.53□□□□□ -0.56
TCOF1-211ENST00000513346 LIASO43766 372 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 GAS2O43903 313 aaKnown RBP11.53□□□□□ -0.56
TCOF1-211ENST00000513346 GRIK1P39086 918 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 CACNB2Q08289 660 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-211ENST00000513346 DEFB115Q30KQ5 88 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 ZDHHC24Q6UX98 284 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 ARCQ7LC44 396 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 ADCY4Q8NFM4 1077 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 DCUN1D1Q96GG9 259 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 CLPTM1LQ96KA5 538 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 TUBGCP5Q96RT8 1024 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 EPS8L2Q9H6S3 715 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 WDR37Q9Y2I8 494 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 TIMM44O43615 452 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 TRIM13O60858 407 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 CDC16Q13042 620 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 CCDC153Q494R4 210 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 SV2AQ7L0J3 742 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 CERS5Q8N5B7 392 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 SAMD3Q8N6K7 520 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 C9orf16Q9BUW7 83 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 OSBPL11Q9BXB4 747 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 IDI2Q9BXS1 227 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 ZNF518BQ9C0D4 1074 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 NIF3L1Q9GZT8 377 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 EBF3Q9H4W6 596 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 UBAP1Q9NZ09 502 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 PRKAG3Q9UGI9 489 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 GAKO14976 1311 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 FRMPD4Q14CM0 1322 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 PHLPP1O60346 1717 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 ADM5C9JUS6 153 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 MFN2O95140 757 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 ETS1P14921 441 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 KCNK10P57789 538 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 PRKAA1Q13131 559 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 MAPK11Q15759 364 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 AGKQ53H12 422 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 CAMK1DQ8IU85 385 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 WDR41Q9HAD4 459 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 SLC38A7Q9NVC3 462 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 RAB26Q9ULW5 256 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 MRC1P22897 1456 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 ALLCQ8N6M5 410 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 OR6P1Q8NGX9 317 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 C17orf50Q8WW18 174 aa11.53□□□□□ -0.56
TCOF1-211ENST00000513346 TSPAN17Q96FV3 270 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms