RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 CYP2W1Q8TAV3 490 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 MGAT4DA6NG13 374 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 TMEM114B3SHH9 223 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 SERPINI2O75830 405 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 KRT6AP02538 564 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 KRT6BP04259 564 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 KRT6CP48668 564 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 RHOAP61586 193 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 ELAVL2Q12926 359 aaKnown RBP12.78□□□□□ -0.36
COL11A1-210ENST00000512756 SLC15A2Q16348 729 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 ZNF280DQ6N043 979 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 YTHDF3Q7Z739 585 aaKnown RBP12.78□□□□□ -0.36
COL11A1-210ENST00000512756 MREGQ8N565 214 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 ELOVL6Q9H5J4 265 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 NMRAL1Q9HBL8 299 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 USE1Q9NZ43 259 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 A0A096LPK6 155 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 MICAL2O94851 1124 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 MBL2P11226 248 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-210ENST00000512756 PSMA3P25788 255 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 TKTP29401 623 aaKnown RBP12.78□□□□□ -0.36
COL11A1-210ENST00000512756 KRT20P35900 424 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 CAMK2GQ13555 558 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-210ENST00000512756 FAM98BQ52LJ0 330 aaKnown RBP12.78□□□□□ -0.36
COL11A1-210ENST00000512756 ARMC6Q6NXE6 501 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 ZFP42Q96MM3 310 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 ASB2Q96Q27 587 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 BDH2Q9BUT1 245 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 IDI2Q9BXS1 227 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 CNOT3O75175 753 aaKnown RBP12.78□□□□□ -0.36
COL11A1-210ENST00000512756 VPS4BO75351 444 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 CHI3L1P36222 383 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-210ENST00000512756 NME5P56597 212 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 PLIN5Q00G26 463 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 SCARA3Q6AZY7 606 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 LUZP2Q86TE4 346 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 BTN2A2Q8WVV5 523 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 CAMKK2Q96RR4 588 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 PRRG3Q9BZD7 231 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 SPATC1LQ9H0A9 340 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 DDX43Q9NXZ2 648 aaKnown RBP12.78□□□□□ -0.36
COL11A1-210ENST00000512756 KCNK4Q9NYG8 393 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 SLC25A13Q9UJS0 675 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 SORCS3Q9UPU3 1222 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 TSC22D4Q9Y3Q8 395 aa12.78□□□□□ -0.36
COL11A1-210ENST00000512756 WDR27A2RRH5 827 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 INSRRP14616 1297 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 AXLP30530 894 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 SLC6A3Q01959 620 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 NR6A1Q15406 480 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 LRRC38Q5VT99 294 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 SLC27A1Q6PCB7 646 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 OOSP2Q86WS3 158 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 CCDC103Q8IW40 242 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 TSEN2Q8NCE0 465 aaKnown RBP12.77□□□□□ -0.36
COL11A1-210ENST00000512756 TMEM79Q9BSE2 394 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 FBXO44Q9H4M3 255 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 DYRK1BQ9Y463 629 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 SPACA6W5XKT8 324 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 PTAR1Q7Z6K3 402 aaPredicted RBP12.77□□□□□ -0.36
COL11A1-210ENST00000512756 HERC6Q8IVU3 1022 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 STK32AQ8WU08 396 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 UCMAQ8WVF2 138 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 GLMNQ92990 594 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 NSMCE2Q96MF7 247 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 RABGEF1Q9UJ41 708 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 PNMA8BQ9ULN7 279 aaPredicted RBP12.77□□□□□ -0.36
COL11A1-210ENST00000512756 DOLKQ9UPQ8 538 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 C15orf41Q9Y2V0 281 aa12.77□□□□□ -0.36
COL11A1-210ENST00000512756 BAIAP3O94812 1187 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 HOXC6P09630 235 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 ME2P23368 584 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 MGAT1P26572 445 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 CCT8P50990 548 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 RAB27AP51159 221 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 SOX10P56693 466 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 CDC16Q13042 620 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 MSLNQ13421 630 aaPredicted RBP12.77□□□□□ -0.37
COL11A1-210ENST00000512756 POU6F1Q14863 301 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 DHFR2Q86XF0 187 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 ZFRQ96KR1 1074 aaKnown RBP12.77□□□□□ -0.37
COL11A1-210ENST00000512756 ACTR8Q9H981 624 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 DMAP1Q9NPF5 467 aaPredicted RBP12.77□□□□□ -0.37
COL11A1-210ENST00000512756 KRT84Q9NSB2 600 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 PCYOX1Q9UHG3 505 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 VPS28Q9UK41 221 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 ZNF839A8K0R7 811 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 CYP1A1P04798 512 aaPredicted RBP12.77□□□□□ -0.37
COL11A1-210ENST00000512756 TSHRP16473 764 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 MIPP30301 263 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 GPC1P35052 558 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 DPYSL3Q14195 570 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 TRIP4Q15650 581 aaPredicted RBP12.77□□□□□ -0.37
COL11A1-210ENST00000512756 CBWD6Q4V339 395 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 SLC45A4Q5BKX6 768 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 CBWD3Q5JTY5 395 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 CBWD5Q5RIA9 395 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 KRT78Q8N1N4 520 aa12.77□□□□□ -0.37
COL11A1-210ENST00000512756 KAT2BQ92831 832 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms