RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CCPG1Q9ULG6 757 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 PRELID1Q9Y255 219 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 VPS9D1Q9Y2B5 631 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 ERVK-7P63135 1459 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZNF536O15090 1300 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 DENND3A2RUS2 1198 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 LRRD1A4D1F6 860 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 ISM1B1AKI9 464 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 CXCL11O14625 94 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 HNRNPDLO14979 420 aaKnown RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 KLK10O43240 276 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 SLCO2B1O94956 709 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 HPGDP15428 266 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 NFKBIAP25963 317 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 MCM7P33993 719 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 PSMB10P40306 273 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 CRKLP46109 303 aaKnown RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 AARSP49588 968 aaKnown RBP eCLIP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 HK3P52790 923 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 DMPKQ09013 629 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 LRRC24Q50LG9 513 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 FSCBQ5H9T9 825 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZNF772Q68DY9 489 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 P3H2Q8IVL5 708 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 KIAA2013Q8IYS2 634 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 SIX6OS1Q8N1H7 587 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 MB21D1Q8N884 522 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 FAM133AQ8N9E0 248 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 SLC22A17Q8WUG5 538 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 SSH1Q8WYL5 1049 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 CFHR4Q92496 578 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 PCIF1Q9H4Z3 704 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 TTC12Q9H892 705 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 MED4Q9NPJ6 270 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 INTS13Q9NVM9 706 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 KLHL9Q9P2J3 617 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 SUCLA2Q9P2R7 463 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 SPASTQ9UBP0 616 aa6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 MBD1Q9UIS9 605 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC11-209ENST00000512476 NVLO15381 856 aaKnown RBP6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 TNFSF14O43557 240 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 OR2C1O95371 312 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 ANXA2P07355 339 aaKnown RBP6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 APEHP13798 732 aaKnown RBP6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 PECAM1P16284 738 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 MCM5P33992 734 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 GCLCP48506 637 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 SLC16A1P53985 500 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 MLLT6P55198 1093 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 SCAPQ12770 1279 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 CEBPEQ15744 281 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 PCGF3Q3KNV8 242 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 MBLAC2Q68D91 279 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 CATSPERGQ6ZRH7 1159 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 PIK3AP1Q6ZUJ8 805 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 C16orf59Q7L2K0 433 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 HEATR3Q7Z4Q2 680 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 UBE3DQ7Z6J8 389 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 MICU3Q86XE3 530 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 PSTKQ8IV42 348 aaKnown RBP6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 CCDC83Q8IWF9 413 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 KDM1BQ8NB78 822 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 CDK15Q96Q40 435 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 RUFY1Q96T51 708 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 MMP19Q99542 508 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 NYXQ9GZU5 481 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 SH2D4AQ9H788 454 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 RXFP1Q9HBX9 757 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZNF70Q9UC06 446 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 SLC8A2Q9UPR5 921 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 HPS5Q9UPZ3 1129 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 TEX264Q9Y6I9 313 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 CCDC151A5D8V7 595 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 WNT7AO00755 349 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 CYTIPO60759 359 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 S100A6P06703 90 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 CTSBP07858 339 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 AGAP20933 346 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 GALP22466 123 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 CHMLP26374 656 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 ADSSP30520 456 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 WNT5AP41221 380 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 PAFAH1B1P43034 410 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 ETF1P62495 437 aaKnown RBP6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 MYLK3Q32MK0 819 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 TCTE1Q5JU00 501 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 NEK5Q6P3R8 708 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 KLC3Q6P597 504 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 KIF6Q6ZMV9 814 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZNF600Q6ZNG1 722 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 RNF44Q7L0R7 432 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 FAM129CQ86XR2 697 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 ZDHHC17Q8IUH5 632 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 CCDC13Q8IYE1 715 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 RTL3Q8N8U3 475 aaKnown RBP6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 OR9A1PQ8NGU1 263 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 HUS1BQ8NHY5 278 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 COPS5Q92905 334 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 EID2BQ96D98 161 aa6.54□□□□□ -1.36
TRAPPC11-209ENST00000512476 PTPN18Q99952 460 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms