RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ARRB1P49407 418 aaPredicted RBP13.17□□□□□ -0.3
DDX41-215ENST00000512431 ACADVLP49748 655 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 AP3M2P53677 418 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 UCNP55089 124 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 SNRPFP62306 86 aaKnown RBP13.17□□□□□ -0.3
DDX41-215ENST00000512431 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 SFSWAPQ12872 951 aaKnown RBP13.17□□□□□ -0.3
DDX41-215ENST00000512431 PRAMEF14Q5SWL7 426 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 KIAA0895LQ68EN5 471 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 FBXL19Q6PCT2 694 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 GPRIN1Q7Z2K8 1008 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 UNC93AQ86WB7 457 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 DENND1CQ8IV53 801 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 SPACA3Q8IXA5 215 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 CRYBG2Q8N1P7 616 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 ZNF276Q8N554 614 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 ZNF248Q8NDW4 579 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 PANK2Q9BZ23 570 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 PNPLA8Q9NP80 782 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 AASDHPPTQ9NRN7 309 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 AGPAT3Q9NRZ7 376 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 FAM49BQ9NUQ9 324 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 AGO1Q9UL18 857 aaKnown RBP13.17□□□□□ -0.3
DDX41-215ENST00000512431 STRIP2Q9ULQ0 834 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
DDX41-215ENST00000512431 SRPRBQ9Y5M8 271 aaKnown RBP13.17□□□□□ -0.3
DDX41-215ENST00000512431 MUC22E2RYF6 1773 aaPredicted RBP13.17□□□□□ -0.3
DDX41-215ENST00000512431 A0A1W2PPC4 97 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 B8ZZF3 427 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 KIF20AO95235 890 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 NDST1P52848 882 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 TMPRSS3P57727 454 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 RPS14P62263 151 aaKnown RBP13.16□□□□□ -0.3
DDX41-215ENST00000512431 PDE4CQ08493 712 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 EFEMP1Q12805 493 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 NCOA4Q13772 614 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 TBC1D25Q3MII6 688 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 MPPE1Q53F39 396 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 PCSK4Q6UW60 755 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 CACTIN-AS1Q8N1I8 211 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 C12orf29Q8N999 325 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 FAM181AQ8N9Y4 354 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 RBBP8NLQ8NC74 664 aaPredicted RBP13.16□□□□□ -0.3
DDX41-215ENST00000512431 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 SAP25Q8TEE9 199 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 WFIKKN2Q8TEU8 576 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 P2RY11Q96G91 374 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 TMEM245Q9H330 911 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 GDF3Q9NR23 364 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 CLIC5Q9NZA1 410 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 SUN2Q9UH99 717 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 FBXO2Q9UK22 296 aaPredicted RBP13.16□□□□□ -0.3
DDX41-215ENST00000512431 SCML1Q9UN30 329 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 CLCA2Q9UQC9 943 aa13.16□□□□□ -0.3
DDX41-215ENST00000512431 RNASEH1O60930 286 aaKnown RBP13.15□□□□□ -0.3
DDX41-215ENST00000512431 ATP5BP06576 529 aaKnown RBP13.15□□□□□ -0.3
DDX41-215ENST00000512431 CKMT2P17540 419 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 SGSM1Q2NKQ1 1148 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 SLC45A4Q5BKX6 768 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 TMEM215Q68D42 235 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 ZNF776Q68DI1 518 aaPredicted RBP13.15□□□□□ -0.3
DDX41-215ENST00000512431 CLEC20AQ6ZU45 233 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 USP30Q70CQ3 517 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 RSRC2Q7L4I2 434 aaKnown RBP13.15□□□□□ -0.3
DDX41-215ENST00000512431 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 ZNF366Q8N895 744 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 CYB5D2Q8WUJ1 264 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 TSC1Q92574 1164 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 HPS3Q969F9 1004 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 CYFIP2Q96F07 1278 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 SLC6A18Q96N87 628 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 CLIC6Q96NY7 704 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 HNRNPABQ99729 332 aaKnown RBP13.15□□□□□ -0.3
DDX41-215ENST00000512431 SDCBP2Q9H190 292 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 PRSS16Q9NQE7 514 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 CLEC4EQ9ULY5 219 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 CLIC4Q9Y696 253 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 TENM4Q6N022 2769 aa13.15□□□□□ -0.3
DDX41-215ENST00000512431 COL5A1P20908 1838 aaPredicted RBP13.15□□□□□ -0.3
DDX41-215ENST00000512431 TMEM131Q92545 1883 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 LRRC72A6NJI9 287 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 HHLA1C9JL84 531 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 TGFB1I1O43294 461 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 EXOC3O60645 756 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 IGHV4-34P06331 123 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 C7P10643 843 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 CD38P28907 300 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 HOXD13P35453 343 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 KIF11P52732 1056 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 PCBP4P57723 403 aaKnown RBP13.14□□□□□ -0.31
DDX41-215ENST00000512431 AMPD3Q01432 767 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 PKDCCQ504Y2 493 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 ARHGAP40Q5TG30 622 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 CHST9Q7L1S5 443 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 SCD5Q86SK9 330 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 ERICH1Q86X53 443 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 NELFCDQ8IXH7 590 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 AHI1Q8N157 1196 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms