RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 PPM1KQ8N3J5 372 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 FRMD1Q8N878 549 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 EHBP1Q8NDI1 1231 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 CCDC26Q8TAB7 109 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 OLIG1Q8TAK6 271 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 SLC35F5Q8WV83 523 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 KCTD13Q8WZ19 329 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 MRFAP1L1Q96HT8 127 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 LOXL4Q96JB6 756 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 CNOT6LQ96LI5 555 aaKnown RBP6.1□□□□□ -1.43
RNF4-217ENST00000511892 KREMEN1Q96MU8 473 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 NT5C1BQ96P26 610 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 CDK5RAP1Q96SZ6 601 aaKnown RBP6.1□□□□□ -1.43
RNF4-217ENST00000511892 ACOX2Q99424 681 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 BBS2Q9BXC9 721 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 TPSD1Q9BZJ3 242 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 ARRDC1-AS1Q9H2J1 176 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 SMOC1Q9H4F8 434 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 CD248Q9HCU0 757 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 DNAJC17Q9NVM6 304 aaKnown RBP6.1□□□□□ -1.43
RNF4-217ENST00000511892 WDR35Q9P2L0 1181 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 RASAL2Q9UJF2 1139 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 LSM7Q9UK45 103 aaKnown RBP6.1□□□□□ -1.43
RNF4-217ENST00000511892 FBXO10Q9UK96 956 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 AGO1Q9UL18 857 aaKnown RBP6.1□□□□□ -1.43
RNF4-217ENST00000511892 KIAA1257Q9ULG3 409 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.1□□□□□ -1.43
RNF4-217ENST00000511892 ZKSCAN5Q9Y2L8 839 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 PCDHB4Q9Y5E5 795 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 MAP1BP46821 2468 aaKnown RBP6.1□□□□□ -1.43
RNF4-217ENST00000511892 KMT2BQ9UMN6 2715 aaPredicted RBP6.1□□□□□ -1.43
RNF4-217ENST00000511892 EPG5Q9HCE0 2579 aa6.1□□□□□ -1.43
RNF4-217ENST00000511892 PCDH15Q96QU1 1955 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 TMEM131Q92545 1883 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 A0A1W2PQF6 199 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 SLC12A8A0AV02 714 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 MED19A0JLT2 244 aaPredicted RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 DCDC2BA2VCK2 349 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 PRRT4C9JH25 899 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 PIK3R2O00459 728 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 CBFA2T2O43439 604 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 GNA14O95837 355 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 PENKP01210 267 aaPredicted RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 AFPP02771 609 aaKnown RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 SETSIPP0DME0 302 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 LCP1P13796 627 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 BRD2P25440 801 aaKnown RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 ERCC5P28715 1186 aaPredicted RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 CORO1AP31146 461 aaKnown RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 WASP42768 502 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 RPL34P49207 117 aaKnown RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 RGS7P49802 495 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 ZNF75DP51815 510 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 SLC8A3P57103 927 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 DAOAP59103 153 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 COG7P83436 770 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 FOXK2Q01167 660 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 MYL5Q02045 173 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 APBA1Q02410 837 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 GCNT1Q02742 428 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 GOLGA8FQ08AF8 430 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 GOLGA8DPQ0D2H9 430 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 TRIP4Q15650 581 aaPredicted RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 CNGA2Q16280 664 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 MAP7D1Q3KQU3 841 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 EOGTQ5NDL2 527 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 C10orf76Q5T2E6 689 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 BSPRYQ5W0U4 402 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 GRAMD4Q6IC98 578 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 C11orf57Q6ZUT1 292 aaPredicted RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 RSRC2Q7L4I2 434 aaKnown RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 LUZP1Q86V48 1076 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 DENND1CQ8IV53 801 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 FMNL3Q8IVF7 1028 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 FAM217AQ8IXS0 508 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 CYP4X1Q8N118 509 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 SCML4Q8N228 414 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 ARHGAP18Q8N392 663 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 ZNF513Q8N8E2 541 aaPredicted RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 RBBP8NLQ8NC74 664 aaPredicted RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 CLEC4CQ8WTT0 213 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 RLN3Q8WXF3 142 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 EDEM1Q92611 657 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 BHMTQ93088 406 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 XPO6Q96QU8 1125 aaKnown RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 INTS2Q9H0H0 1204 aaKnown RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 UBE2TQ9NPD8 197 aaPredicted RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 RXFP3Q9NSD7 469 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 PLK2Q9NYY3 685 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 MARCH2Q9P0N8 246 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 HESX1Q9UBX0 185 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 SFMBT1Q9UHJ3 866 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 MBD1Q9UIS9 605 aaPredicted RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 RWDD2AQ9UIY3 292 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 CLEC4EQ9ULY5 219 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 CNTN6Q9UQ52 1028 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 ZNF510Q9Y2H8 683 aa6.09□□□□□ -1.43
RNF4-217ENST00000511892 FCF1Q9Y324 198 aaKnown RBP6.09□□□□□ -1.43
RNF4-217ENST00000511892 TCRBV21S2A2A0A5A6 115 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms