RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 TCEAL3Q969E4 200 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 ERLEC1Q96DZ1 483 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 NUP62CLQ9H1M0 184 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 VPS45Q9NRW7 570 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 BCCIPQ9P287 314 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHFR-208ENST00000511001 THAP10Q9P2Z0 257 aaPredicted RBP12.56□□□□□ -0.4
CHFR-208ENST00000511001 LAMA1P25391 3075 aa12.56□□□□□ -0.4
CHFR-208ENST00000511001 PAPSS1O43252 624 aaPredicted RBP12.55□□□□□ -0.4
CHFR-208ENST00000511001 THAP12O43422 761 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 CAVIN2O95810 425 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 CYBBP04839 570 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 ERCC5P28715 1186 aaPredicted RBP12.55□□□□□ -0.4
CHFR-208ENST00000511001 IL12RB1P42701 662 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 ACADSBP45954 432 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 HARS2P49590 506 aaKnown RBP12.55□□□□□ -0.4
CHFR-208ENST00000511001 LIMK1P53667 647 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 AASDHQ4L235 1098 aaPredicted RBP12.55□□□□□ -0.4
CHFR-208ENST00000511001 MPPE1Q53F39 396 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 FAM133BQ5BKY9 247 aaKnown RBP12.55□□□□□ -0.4
CHFR-208ENST00000511001 MIIPQ5JXC2 388 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 ADGRF1Q5T601 910 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 RNF43Q68DV7 783 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 NADSYN1Q6IA69 706 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 ANKS1BQ7Z6G8 1248 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 SCUBE3Q8IX30 993 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 PGBD3Q8N328 593 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 WDTC1Q8N5D0 677 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 DQX1Q8TE96 717 aaKnown RBP12.55□□□□□ -0.4
CHFR-208ENST00000511001 STK32AQ8WU08 396 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 SLC39A13Q96H72 371 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 FCRL2Q96LA5 508 aaPredicted RBP12.55□□□□□ -0.4
CHFR-208ENST00000511001 FAM81BQ96LP2 452 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 SLC2A11Q9BYW1 496 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 CD93Q9NPY3 652 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 ST7Q9NRC1 585 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 CALCOCO1Q9P1Z2 691 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 TJP2Q9UDY2 1190 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 NAALADL1Q9UQQ1 740 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 STON1Q9Y6Q2 735 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 CFAP47Q6ZTR5 3102 aa12.55□□□□□ -0.4
CHFR-208ENST00000511001 NYNRINQ9P2P1 1898 aaKnown RBP12.55□□□□□ -0.4
CHFR-208ENST00000511001 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 GOLGA6L7A0A1B0GV03 622 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 E5RJQ4 531 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 TM4SF5O14894 197 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 MED7O43513 233 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 ACSL4O60488 711 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 NCAM1P13591 858 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 HLA-FP30511 346 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 SLC6A4P31645 630 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 DHPSP49366 369 aaPredicted RBP12.54□□□□□ -0.4
CHFR-208ENST00000511001 TBX4P57082 545 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 RING1Q06587 406 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 KCNMA1Q12791 1236 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 NNTQ13423 1086 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 ZNF234Q14588 700 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 TPD52L1Q16890 204 aaPredicted RBP12.54□□□□□ -0.4
CHFR-208ENST00000511001 PIK3R6Q5UE93 754 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 SYPL2Q5VXT5 272 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 SDE2Q6IQ49 451 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 BEND5Q7L4P6 421 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 KIAA0907Q7Z7F0 614 aaPredicted RBP12.54□□□□□ -0.4
CHFR-208ENST00000511001 TMEM110Q86TL2 294 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 TMEFF1Q8IYR6 380 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 C12orf50Q8NA57 414 aaPredicted RBP12.54□□□□□ -0.4
CHFR-208ENST00000511001 WFDC5Q8TCV5 224 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 SORCS1Q8WY21 1168 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 AZIN2Q96A70 460 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 TMA16Q96EY4 203 aaKnown RBP12.54□□□□□ -0.4
CHFR-208ENST00000511001 MYEOVQ96EZ4 313 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 SPACA7Q96KW9 195 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 SLC6A17Q9H1V8 727 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 NDST4Q9H3R1 872 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 ELOVL2Q9NXB9 296 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 PCDH15Q96QU1 1955 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 CACNA1EQ15878 2313 aa12.54□□□□□ -0.4
CHFR-208ENST00000511001 IGHV1OR15-9A0A0B4J2B8 117 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 PATE3B3GLJ2 98 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 IGLV3-25P01717 112 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 PNMA6AP0CW24 399 aaPredicted RBP12.53□□□□□ -0.4
CHFR-208ENST00000511001 PRKCHP24723 683 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 CLCN1P35523 988 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 USP8P40818 1118 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 PTGER3P43115 390 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 ZNF445P59923 1031 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 PITX1P78337 314 aaPredicted RBP12.53□□□□□ -0.4
CHFR-208ENST00000511001 PDCLQ13371 301 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 EIF4EBP2Q13542 120 aaPredicted RBP12.53□□□□□ -0.4
CHFR-208ENST00000511001 BYSLQ13895 437 aaKnown RBP12.53□□□□□ -0.4
CHFR-208ENST00000511001 EIF4HQ15056 248 aaKnown RBP12.53□□□□□ -0.4
CHFR-208ENST00000511001 ST3GAL2Q16842 350 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 FUT11Q495W5 492 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 VWA3BQ502W6 1294 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 HSP90AA4PQ58FG1 418 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 STPG1Q5TH74 334 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 NUGGCQ68CJ6 796 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 SMYD5Q6GMV2 418 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 RFWD3Q6PCD5 774 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 LPCAT2Q7L5N7 544 aa12.53□□□□□ -0.4
CHFR-208ENST00000511001 CYP2U1Q7Z449 544 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms