RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PEG10Q86TG7 708 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 ZNF669Q96BR6 464 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 B3GALT6Q96L58 329 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 YTHDF1Q9BYJ9 559 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 SSU72Q9NP77 194 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 SNX9Q9Y5X1 595 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 GJA3Q9Y6H8 435 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 NR3C2P08235 984 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 CAPZA2P47755 286 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 FAM187BQ17R55 369 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 DYNLL2Q96FJ2 89 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 WWOXQ9NZC7 414 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 NCANO14594 1321 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 SLIT1O75093 1534 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 UQCRBP14927 111 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 NEK3P51956 506 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 ITGADQ13349 1161 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 BLMHQ13867 455 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 FASTKQ14296 549 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 USP39Q53GS9 565 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 COBLL1Q53SF7 1204 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 AGPAT3Q9NRZ7 376 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 INO80Q9ULG1 1556 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 TRAFD1O14545 582 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 ITGAVP06756 1048 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 ZNF605Q86T29 641 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 CLVS1Q8IUQ0 354 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 TEX13BQ9BXU2 312 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 KPNA3O00505 521 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 SYNCRIPO60506 623 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 APOL3O95236 402 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 LDOC1O95751 146 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 VAC14Q08AM6 782 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 CLHC1Q8NHS4 586 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 RP9Q8TA86 221 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 SLC20A1Q8WUM9 679 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 HAVCR1Q96D42 359 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 TBC1D10AQ9BXI6 508 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 TMEM9Q9P0T7 183 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 ASB14A6NK59 587 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 DYNC1LI2O43237 492 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 PDK3Q15120 406 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 IER5Q5VY09 327 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 DENND6AQ8IWF6 608 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 GJD3Q8N144 294 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 TCF12Q99081 682 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 PDK4Q16654 411 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 RIBC2Q9H4K1 309 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 EPB41L4AQ9HCS5 686 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 ATP9BO43861 1147 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 FAM20BO75063 409 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 HNRNPH3P31942 346 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 CHI3L1P36222 383 aaPredicted RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 LRRC74AQ0VAA2 488 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 PTGES3Q15185 160 aaKnown RBP8.57□□□□□ -1.04
HTT-208ENST00000510626 OR2W6PQ8NHA6 318 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 TRMOQ9BU70 441 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 SLC39A8Q9C0K1 460 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 TRIM10Q9UDY6 481 aa8.57□□□□□ -1.04
HTT-208ENST00000510626 NME3Q13232 169 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 WDR72Q3MJ13 1102 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 SYTL3Q4VX76 610 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 METTL21CQ5VZV1 264 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 FASTKD5Q7L8L6 764 aaKnown RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 LRRC17Q8N6Y2 441 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 CPA5Q8WXQ8 436 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 AKR1B1P15121 316 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 PSMB9P28065 219 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 PHKG1Q16816 387 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 THEMIS2Q5TEJ8 643 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 FAR1Q8WVX9 515 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 BSNDQ8WZ55 320 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 KIF12Q96FN5 646 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 RTKNQ9BST9 563 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 TRPM5Q9NZQ8 1165 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 ITGA11Q9UKX5 1188 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 SLC30A1Q9Y6M5 507 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 RASA1P20936 1047 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 MTX3Q5HYI7 312 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 PRMT7Q9NVM4 692 aaPredicted RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 TAS2R1Q9NYW7 299 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 GGT7Q9UJ14 662 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 ANAPC2Q9UJX6 822 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 PADI4Q9UM07 663 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 SPACA6W5XKT8 324 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 NPHP3-ACAD11A0A0J9YXS1 232 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 FAM237AA0A1B0GTK4 181 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 ATG7O95352 703 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 PSMD4P55036 377 aaKnown RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 UBE3AQ05086 875 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 DGKDQ16760 1214 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 PTRHD1Q6GMV3 140 aaKnown RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 GPAT2Q6NUI2 795 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 IFNEQ86WN2 208 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 STK40Q8N2I9 435 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 PROX1Q92786 737 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 SPATA33Q96N06 139 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 GIN1Q9NXP7 522 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 UMODL1Q5DID0 1318 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 FAM92AA1XBS5 289 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms