RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 LGMNQ99538 433 aa15.32■□□□□ 0.04
USP38-202ENST00000510377 FAM192AQ9GZU8 254 aa15.32■□□□□ 0.04
USP38-202ENST00000510377 IARS2Q9NSE4 1012 aaKnown RBP15.32■□□□□ 0.04
USP38-202ENST00000510377 DPP3Q9NY33 737 aa15.32■□□□□ 0.04
USP38-202ENST00000510377 BTBD7Q9P203 1132 aa15.32■□□□□ 0.04
USP38-202ENST00000510377 SNX13Q9Y5W8 968 aa15.32■□□□□ 0.04
USP38-202ENST00000510377 BCORQ6W2J9 1755 aa15.32■□□□□ 0.04
USP38-202ENST00000510377 A0A087WZ62 844 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 NME5P56597 212 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 GBE1Q04446 702 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 GRIK3Q13003 919 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 CDHR3Q6ZTQ4 885 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 GORASP1Q9BQQ3 440 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 FDXACB1Q9BRP7 624 aaPredicted RBP15.31■□□□□ 0.04
USP38-202ENST00000510377 B3GNT5Q9BYG0 378 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 LNPEPQ9UIQ6 1025 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 V9GYQ6 96 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 ZNF536O15090 1300 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 SERPINA6P08185 405 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 KRT72Q14CN4 511 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 TCEAL1Q15170 157 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 DPP9Q86TI2 863 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 EXOC8Q8IYI6 725 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 KLK14Q9P0G3 267 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 HACL1Q9UJ83 578 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 CDYLQ9Y232 598 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 UBR2Q8IWV8 1755 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 GLI3P10071 1580 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 GNAZP19086 355 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 GRK2P25098 689 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 GRIA1P42261 906 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 ACAP1Q15027 740 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 PRKD1Q15139 912 aaPredicted RBP15.31■□□□□ 0.04
USP38-202ENST00000510377 TMEM63BQ5T3F8 832 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 ZPBP2Q6X784 338 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 APOBEC3FQ8IUX4 373 aaKnown RBP15.31■□□□□ 0.04
USP38-202ENST00000510377 FBXL18Q96ME1 805 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 NRDE2Q9H7Z3 1164 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 NOD1Q9Y239 953 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 LRP5O75197 1615 aa15.31■□□□□ 0.04
USP38-202ENST00000510377 DOT1LQ8TEK3 1739 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 TOGARAM1Q9Y4F4 1720 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 A0A096LPK6 155 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 DFFAO00273 331 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 IL18RAPO95256 599 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 THRAP10827 490 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 TPI1P60174 286 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 NOMO1Q15155 1222 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 LIN52Q52LA3 116 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 FBXO27Q8NI29 283 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 DIS3LQ8TF46 1054 aaKnown RBP15.3■□□□□ 0.04
USP38-202ENST00000510377 DTNBP1Q96EV8 351 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 EBNA1BP2Q99848 306 aaKnown RBP15.3■□□□□ 0.04
USP38-202ENST00000510377 WDR55Q9H6Y2 383 aaPredicted RBP15.3■□□□□ 0.04
USP38-202ENST00000510377 CNTNAP2Q9UHC6 1331 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 ITGB4P16144 1822 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 EEF2KO00418 725 aaKnown RBP15.3■□□□□ 0.04
USP38-202ENST00000510377 PHGDHO43175 533 aaKnown RBP15.3■□□□□ 0.04
USP38-202ENST00000510377 HUS1O60921 280 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 MCF2P10911 925 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 ZNF143P52747 638 aaPredicted RBP15.3■□□□□ 0.04
USP38-202ENST00000510377 CYLC2Q14093 348 aaPredicted RBP15.3■□□□□ 0.04
USP38-202ENST00000510377 SEL1L3Q68CR1 1132 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 CYP2R1Q6VVX0 501 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 GALNT15Q8N3T1 639 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 ADAM32Q8TC27 787 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 RNF217Q8TC41 542 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 PPP1R13LQ8WUF5 828 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 JADE3Q92613 823 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 S100A14Q9HCY8 104 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 STAP1Q9ULZ2 295 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 RNF103O00237 685 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 CSPG5O95196 566 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 ALDH1A3P47895 512 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 AQP4P55087 323 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 HDAC4P56524 1084 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 DRICH1Q6PGQ1 229 aaPredicted RBP15.3■□□□□ 0.04
USP38-202ENST00000510377 MTHFD1LQ6UB35 978 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 BEST2Q8NFU1 509 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 OR6P1Q8NGX9 317 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 SLC7A14Q8TBB6 771 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 HTR3CQ8WXA8 447 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 CAMKK2Q96RR4 588 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 MMADHCQ9H3L0 296 aaPredicted RBP15.3■□□□□ 0.04
USP38-202ENST00000510377 PFDN4Q9NQP4 134 aa15.3■□□□□ 0.04
USP38-202ENST00000510377 MAP3K20Q9NYL2 800 aaKnown RBP15.3■□□□□ 0.04
USP38-202ENST00000510377 TRDMT1O14717 391 aaKnown RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 PMM2O15305 246 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 UBA1P22314 1058 aaKnown RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 EPHA3P29320 983 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 CCNFP41002 786 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 PHEXP78562 749 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 PDAP1Q13442 181 aaKnown RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 XYLT1Q86Y38 959 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 PCDH20Q8N6Y1 951 aaKnown RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 PLD5Q8N7P1 536 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 KYQ8NBH2 561 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 NTPCRQ9BSD7 190 aaKnown RBP15.29■□□□□ 0.04
USP38-202ENST00000510377 STRA6Q9BX79 667 aa15.29■□□□□ 0.04
USP38-202ENST00000510377 FSD1LQ9BXM9 530 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms