RNA–Protein interactions for RNA: ENST00000509990.5

MATR3-237, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-237ENST00000509990 ZNF534Q76KX8 674 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 LONP2Q86WA8 852 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 COLGALT1Q8NBJ5 622 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 TTC13Q8NBP0 860 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 B3GALNT2Q8NCR0 500 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 FNIP1Q8TF40 1166 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 ZNF778Q96MU6 729 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 POPDC2Q9HBU9 364 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 RXFP1Q9HBX9 757 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 DDX43Q9NXZ2 648 aaKnown RBP12.73□□□□□ -0.37
MATR3-237ENST00000509990 CCDC189A1A4V9 331 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 MYL2P10916 166 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 CCR10P46092 362 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 KDSRQ06136 332 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 TFDP2Q14188 446 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 TAF1CQ15572 869 aaPredicted RBP12.73□□□□□ -0.37
MATR3-237ENST00000509990 UBXN11Q5T124 520 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 ATG14Q6ZNE5 492 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 ARHGAP36Q6ZRI8 547 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 SLC25A41Q8N5S1 370 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 OR52K1Q8NGK4 314 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 AGAP2Q99490 1192 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 EBF4Q9BQW3 602 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 TSSK1BQ9BXA7 367 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 SLC4A5Q9BY07 1137 aa12.73□□□□□ -0.37
MATR3-237ENST00000509990 MEI4A8MW99 385 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 ATICP31939 592 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 TMEM110Q86TL2 294 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 VPS52Q8N1B4 723 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 ZNF276Q8N554 614 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 C10orf82Q8WW14 230 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 B3GALT6Q96L58 329 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 OXCT2Q9BYC2 517 aaPredicted RBP12.72□□□□□ -0.37
MATR3-237ENST00000509990 AGO3Q9H9G7 860 aaKnown RBP12.72□□□□□ -0.37
MATR3-237ENST00000509990 NMRK2Q9NPI5 230 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 CPSF2Q9P2I0 782 aaKnown RBP12.72□□□□□ -0.37
MATR3-237ENST00000509990 ZFP69BQ9UJL9 534 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 ZNF638Q14966 1978 aaKnown RBP12.72□□□□□ -0.37
MATR3-237ENST00000509990 RNF103O00237 685 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 MSI1O43347 362 aaKnown RBP12.72□□□□□ -0.37
MATR3-237ENST00000509990 ZMPSTE24O75844 475 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 GHRP10912 638 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 CTGFP29279 349 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 PCK1P35558 622 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 ALDH18A1P54886 795 aaKnown RBP12.72□□□□□ -0.37
MATR3-237ENST00000509990 MRPS5P82675 430 aaKnown RBP12.72□□□□□ -0.37
MATR3-237ENST00000509990 SETDB1Q15047 1291 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 CST9Q5W186 159 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 RWDD4Q6NW29 188 aaKnown RBP12.72□□□□□ -0.37
MATR3-237ENST00000509990 CROCCP2Q86T23 111 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 POU5F2Q8N7G0 328 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 CCHCR1Q8TD31 782 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 RNF34Q969K3 372 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 P2RY11Q96G91 374 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 TMEM120AQ9BXJ8 343 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 CRTAC1Q9NQ79 661 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 ARHGEF4Q9NR80 690 aa12.72□□□□□ -0.37
MATR3-237ENST00000509990 SCAMP3O14828 347 aaKnown RBP12.71□□□□□ -0.37
MATR3-237ENST00000509990 ITM2AO43736 263 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 TCEA3O75764 348 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 ANP32DO95626 131 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 ABHD2P08910 425 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 BDNFP23560 247 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 SERPINB4P48594 390 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 ZNF157P51786 506 aaPredicted RBP12.71□□□□□ -0.37
MATR3-237ENST00000509990 FAM187BQ17R55 369 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 GALNTL6Q49A17 601 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 BOLA3Q53S33 107 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 ANKRD20A2Q5SQ80 823 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 ANKRD20A1Q5TYW2 823 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 ANKRD20A3Q5VUR7 823 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 ISLR2Q6UXK2 745 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 SIX6OS1Q8N1H7 587 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 TBC1D10AQ9BXI6 508 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 KLC2Q9H0B6 622 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 DDIT4Q9NX09 232 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 SYBUQ9NX95 663 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.71□□□□□ -0.377e-25■□□□□ 8.5
MATR3-237ENST00000509990 EYSQ5T1H1 3165 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 AP1G2O75843 785 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 DNAJC8O75937 253 aaPredicted RBP12.71□□□□□ -0.37
MATR3-237ENST00000509990 SORBS2O94875 1100 aaKnown RBP12.71□□□□□ -0.37
MATR3-237ENST00000509990 ENO1P06733 434 aaKnown RBP12.71□□□□□ -0.37
MATR3-237ENST00000509990 PSEN2P49810 448 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 BST1Q10588 318 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 BST2Q10589 180 aaKnown RBP12.71□□□□□ -0.37
MATR3-237ENST00000509990 GRB14Q14449 540 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 ZBTB6Q15916 424 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 CERCAMQ5T4B2 595 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 NPWQ8N729 165 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 ANKRD52Q8NB46 1076 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 SLC44A1Q8WWI5 657 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 NMUR2Q9GZQ4 415 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 VPS11Q9H270 941 aa12.71□□□□□ -0.37
MATR3-237ENST00000509990 C9IYK1 514 aa12.71□□□□□ -0.38
MATR3-237ENST00000509990 MGRN1O60291 552 aa12.71□□□□□ -0.38
MATR3-237ENST00000509990 SOAT2O75908 522 aa12.71□□□□□ -0.38
MATR3-237ENST00000509990 B3GAT3O94766 335 aa12.71□□□□□ -0.38
MATR3-237ENST00000509990 PTPN1P18031 435 aaKnown RBP12.71□□□□□ -0.38
MATR3-237ENST00000509990 STIP1P31948 543 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms