RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 UQCRC1P31930 480 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 MCM5P33992 734 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 KRT9P35527 623 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 CHKAP35790 457 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 TECP42680 631 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 ME1P48163 572 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 CFHR3Q02985 330 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 SLC13A2Q13183 592 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 MTX1Q13505 466 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 POLD3Q15054 466 aaPredicted RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 CCDC96Q2M329 555 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 INTS11Q5TA45 600 aaKnown RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 DCAF12L1Q5VU92 463 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 ANO7Q6IWH7 933 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZNF549Q6P9A3 640 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 B3GNT9Q6UX72 402 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZDHHC24Q6UX98 284 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 LDHAL6AQ6ZMR3 332 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 BRINP3Q76B58 766 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 DAAM2Q86T65 1068 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 COL23A1Q86Y22 540 aaPredicted RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 ANKRD13BQ86YJ7 626 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 SPARTQ8N0X7 666 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZBTB34Q8NCN2 500 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 FAM156AQ8NDB6 213 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 IL17REQ8NFR9 667 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 OR6B3Q8NGW1 331 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 DNAJB14Q8TBM8 379 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 HDAC2Q92769 488 aaKnown RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 USP13Q92995 863 aaPredicted RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 ERP27Q96DN0 273 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 EDC3Q96F86 508 aaKnown RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 SGCZQ96LD1 299 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZSCAN31Q96LW9 406 aaPredicted RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 CRB3Q9BUF7 120 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 NAA15Q9BXJ9 866 aaKnown RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 LRRC27Q9C0I9 530 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 WDR12Q9GZL7 423 aaKnown RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 BTBD1Q9H0C5 482 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 FAM234AQ9H0X4 552 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 ZMAT3Q9HA38 289 aaKnown RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 CERS4Q9HA82 394 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 ATP6V0A4Q9HBG4 840 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 TRIM36Q9NQ86 728 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 STARD7Q9NQZ5 370 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 SNX15Q9NRS6 342 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 MAGED2Q9UNF1 606 aaPredicted RBP2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 TMEM98Q9Y2Y6 226 aa2.73□□□□□ -1.97
DEPDC1B-204ENST00000509006 DOCK7Q96N67 2140 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 BICDL2A1A5D9 508 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 RHPN2P1A8MT19 583 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 AGPSO00116 658 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 TULP3O75386 442 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 TUSC2O75896 110 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 PTMAP06454 111 aaKnown RBP2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 CREB1P16220 341 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 XBP1P17861 261 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 HTR1BP28222 390 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 PEX2P28328 305 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 ELF1P32519 619 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 AGFG1P52594 562 aaKnown RBP2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 YPEL5P62699 121 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 SLC14A1Q13336 389 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 SEMA5AQ13591 1074 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 KCNB1Q14721 858 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 STARD3Q14849 445 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 ANO6Q4KMQ2 910 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 CCDC38Q502W7 563 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 RNF220Q5VTB9 566 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 IZUMO3Q5VZ72 239 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 DENND2CQ68D51 928 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 CYB5RLQ6IPT4 315 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 CFAP161Q6P656 301 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 VSTM1Q6UX27 236 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 COLCA1Q6ZS62 124 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 KCTD20Q7Z5Y7 419 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 PIM3Q86V86 326 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 MICU3Q86XE3 530 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 ADHFE1Q8IWW8 467 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 OR2C3Q8N628 320 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 OR56A3Q8NH54 315 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 MPLKIPQ8TAP9 179 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 TRAPPC12Q8WVT3 735 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 LRTOMTQ8WZ04 291 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 RIPOR3Q96MK2 946 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 SEC62Q99442 399 aaKnown RBP2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 ACO2Q99798 780 aaKnown RBP2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 SLC26A6Q9BXS9 759 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 CLIC5Q9NZA1 410 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 PDP2Q9P2J9 529 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 MGAT4CQ9UBM8 478 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 SLC13A4Q9UKG4 626 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 TPCN1Q9ULQ1 816 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 SNX13Q9Y5W8 968 aa2.72□□□□□ -1.97
DEPDC1B-204ENST00000509006 CCDC196A0A1B0GTZ2 297 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 A0A1B0GVC2 190 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 ANKRD18BA2A2Z9 1011 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 CLIC1O00299 241 aa2.71□□□□□ -1.98
DEPDC1B-204ENST00000509006 CCP110O43303 1012 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms