RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 TRIM25Q14258 630 aaKnown RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 RABEP1Q15276 862 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 KBTBD12Q3ZCT8 623 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 GAGE13Q4V321 117 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 TTC39AQ5SRH9 613 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 ZBTB41Q5SVQ8 909 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 ATG16L1Q676U5 607 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 MFSD5Q6N075 450 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 TMEM110Q86TL2 294 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 ZZZ3Q8IYH5 903 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 C17orf53Q8N3J3 647 aaPredicted RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 GALNT4Q8N4A0 578 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 HSPH1Q92598 858 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 TBC1D5Q92609 795 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 CUL5Q93034 780 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 NKD2Q969F2 451 aaPredicted RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 HDAC10Q969S8 669 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 SYAP1Q96A49 352 aaPredicted RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 LENG9Q96B70 501 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 DYDC2Q96IM9 177 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 MAML3Q96JK9 1138 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 SNX22Q96L94 193 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 MRGPRX1Q96LB2 322 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 C16orf92Q96LL3 132 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 WDR92Q96MX6 357 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 DMRTA2Q96SC8 542 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 ZCWPW1Q9H0M4 648 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 MMADHCQ9H3L0 296 aaPredicted RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 THAP9Q9H5L6 903 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 COPS7BQ9H9Q2 264 aaPredicted RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 SERHLQ9NQF3 203 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 NECTIN3Q9NQS3 549 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 SACM1LQ9NTJ5 587 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 LMBRD1Q9NUN5 540 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 UTP6Q9NYH9 597 aaKnown RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 AKAP7Q9P0M2 348 aaPredicted RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 PTGFRNQ9P2B2 879 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 UBA2Q9UBT2 640 aaPredicted RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 LPAR3Q9UBY5 353 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 AFF4Q9UHB7 1163 aaKnown RBP4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 DNAI1Q9UI46 699 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 SORCS3Q9UPU3 1222 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 ITM2BQ9Y287 266 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 TRIM17Q9Y577 477 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 PCDHA3Q9Y5H8 950 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 PCDHA13Q9Y5I0 950 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 FAM169AQ9Y6X4 670 aa4.6□□□□□ -1.67
SMARCA5-202ENST00000508573 GPR75-ASB3A0A0A6YYF3 556 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 CLCA1A8K7I4 914 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 A8MVJ9 347 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 AP3B1O00203 1094 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 TAF4O00268 1085 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 FCHO1O14526 889 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 RIPK2O43353 540 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 PROM1O43490 865 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 ACTL6BO94805 426 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 IPO13O94829 963 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 JUNP05412 331 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 HEXBP07686 556 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 CNPP09543 421 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 TMIGD3P0DMS9 266 aaPredicted RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 HSPA1AP0DMV8 641 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 HSPA1BP0DMV9 641 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 HK1P19367 917 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 NR4A1P22736 598 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 TMOD1P28289 359 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 RFC1P35251 1148 aaPredicted RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 TCF7P36402 384 aaPredicted RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 MXI1P50539 228 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 NPEPPSP55786 919 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 STARD6P59095 220 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 COL4A3Q01955 1670 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 MALLQ13021 153 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 EIF2B5Q13144 721 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 CEP55Q53EZ4 464 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 PRAMEF14Q5SWL7 426 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 THEMIS2Q5TEJ8 643 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 GARNL3Q5VVW2 1013 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 SLFN12LQ6IEE8 588 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 KCNV1Q6PIU1 500 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 KLHL24Q6TFL4 600 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 PLEKHM3Q6ZWE6 761 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 USP49Q70CQ1 688 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 LPCAT2Q7L5N7 544 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 HEATR3Q7Z4Q2 680 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 ANKS1BQ7Z6G8 1248 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 ADGRA1Q86SQ6 560 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 CLEC14AQ86T13 490 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 MYPNQ86TC9 1320 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 CCDC117Q8IWD4 279 aaPredicted RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 CMTM4Q8IZR5 234 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 SH2D3CQ8N5H7 860 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 ZBTB8BQ8NAP8 495 aaPredicted RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 MDGA1Q8NFP4 955 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 OR5AN1Q8NGI8 311 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 OR2I1PQ8NGU4 316 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 CPT1CQ8TCG5 803 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 DEPDC1BQ8WUY9 529 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms