RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 DUSP12Q9UNI6 340 aa10.65□□□□□ -0.7
HTT-204ENST00000508321 SORCS3Q9UPU3 1222 aa10.65□□□□□ -0.7
HTT-204ENST00000508321 REXO2Q9Y3B8 237 aaKnown RBP10.65□□□□□ -0.7
HTT-204ENST00000508321 ADGRG1Q9Y653 693 aa10.65□□□□□ -0.7
HTT-204ENST00000508321 KCNU1A8MYU2 1149 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 KRT86O43790 486 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 GREM1O60565 184 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 PROSCO94903 275 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 GJB6O95452 261 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 ADH1CP00326 375 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 HTR7P34969 479 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 SLC1A1P43005 524 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 ZNF135P52742 658 aaPredicted RBP10.64□□□□□ -0.71
HTT-204ENST00000508321 MLLT6P55198 1093 aaPredicted RBP10.64□□□□□ -0.71
HTT-204ENST00000508321 HDAC4P56524 1084 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 PITX1P78337 314 aaPredicted RBP10.64□□□□□ -0.71
HTT-204ENST00000508321 ZXDBP98169 803 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 ATP11AP98196 1134 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 AMPD2Q01433 879 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 OGDHQ02218 1023 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 NRG1Q02297 640 aaPredicted RBP10.64□□□□□ -0.71
HTT-204ENST00000508321 ZNF252P-AS1Q0IIN9 211 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 CDO1Q16878 200 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 C15orf59Q2T9L4 293 aaPredicted RBP10.64□□□□□ -0.71
HTT-204ENST00000508321 ADGRF1Q5T601 910 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 TTC39BQ5VTQ0 682 aaPredicted RBP10.64□□□□□ -0.71
HTT-204ENST00000508321 PHLDB2Q86SQ0 1253 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 DNAAF5Q86Y56 855 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 GJD3Q8N144 294 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 ZNF557Q8N988 423 aaPredicted RBP10.64□□□□□ -0.71
HTT-204ENST00000508321 SLC35G2Q8TBE7 412 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 RNF34Q969K3 372 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 EXOC4Q96A65 974 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 RSPRY1Q96DX4 576 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 HAPLN3Q96S86 360 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 FAM83CQ9BQN1 747 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 DESI2Q9BSY9 194 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 WDCPQ9H6R7 721 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 BRD9Q9H8M2 597 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 DUS2Q9NX74 493 aaKnown RBP10.64□□□□□ -0.71
HTT-204ENST00000508321 MARK1Q9P0L2 795 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 AGO1Q9UL18 857 aaKnown RBP10.64□□□□□ -0.71
HTT-204ENST00000508321 MYO10Q9HD67 2058 aa10.64□□□□□ -0.71
HTT-204ENST00000508321 DOCK4Q8N1I0 1966 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 SYNJ2BP-COX16A0A087WUM0 186 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 GOLGA6L9A6NEM1 432 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 ARNTLO00327 626 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 ZSCAN12O43309 604 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 PRPSAP2O60256 369 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 ACSL4O60488 711 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 LRCH4O75427 683 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 CYBBP04839 570 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 HMBSP08397 361 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 GLULP15104 373 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 GDI1P31150 447 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 NR1H3Q13133 447 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 HADHQ16836 314 aaKnown RBP10.63□□□□□ -0.71
HTT-204ENST00000508321 EML3Q32P44 896 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 ZC3H12AQ5D1E8 599 aaKnown RBP10.63□□□□□ -0.71
HTT-204ENST00000508321 EFHC2Q5JST6 749 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 MPP7Q5T2T1 576 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 POLNQ7Z5Q5 900 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 DENND1CQ8IV53 801 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 BBS7Q8IWZ6 715 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 SLC44A3Q8N4M1 653 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 RNF10Q8N5U6 811 aaKnown RBP10.63□□□□□ -0.71
HTT-204ENST00000508321 RIN3Q8TB24 985 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 CSGALNACT1Q8TDX6 532 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 C1orf74Q96LT6 269 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 ADAM33Q9BZ11 813 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 TKTL2Q9H0I9 626 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 KCNF1Q9H3M0 494 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 RETREG1Q9H6L5 497 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 OSGEPQ9NPF4 335 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 GKN1Q9NS71 199 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 COX16Q9P0S2 106 aa10.63□□□□□ -0.71
HTT-204ENST00000508321 F5H5T6 163 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 TNFRSF10AO00220 468 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 HOXC11O43248 304 aaPredicted RBP10.62□□□□□ -0.71
HTT-204ENST00000508321 MOCS2O96007 188 aaPredicted RBP10.62□□□□□ -0.71
HTT-204ENST00000508321 KLKB1P03952 638 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 ASGR2P07307 311 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 KRT7P08729 469 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 TFE3P19532 575 aaPredicted RBP10.62□□□□□ -0.71
HTT-204ENST00000508321 COL9A1P20849 921 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 EIF2DP41214 584 aaKnown RBP10.62□□□□□ -0.71
HTT-204ENST00000508321 NOP2P46087 812 aaKnown RBP10.62□□□□□ -0.71
HTT-204ENST00000508321 GRM2Q14416 872 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 ITPRIPL2Q3MIP1 535 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 PREPLQ4J6C6 727 aaPredicted RBP10.62□□□□□ -0.71
HTT-204ENST00000508321 RABGAP1LQ5R372 815 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 SLFN11Q7Z7L1 901 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 CHSY1Q86X52 802 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 FAM131BQ86XD5 332 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 SUGP1Q8IWZ8 645 aaKnown RBP10.62□□□□□ -0.71
HTT-204ENST00000508321 SYCE1Q8N0S2 351 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 HJURPQ8NCD3 748 aaPredicted RBP10.62□□□□□ -0.71
HTT-204ENST00000508321 TTC16Q8NEE8 873 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 TEKT4Q8WW24 435 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms