RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TMIGD3P0DMS9 266 aaPredicted RBP6.72□□□□□ -1.33
HERC4-213ENST00000506515 C6P13671 934 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 RXRAP19793 462 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 TACR2P21452 398 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 MMP8P22894 467 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 IGHMBP2P38935 993 aaKnown RBP6.72□□□□□ -1.33
HERC4-213ENST00000506515 SIM1P81133 766 aaPredicted RBP6.72□□□□□ -1.33
HERC4-213ENST00000506515 CCDC15Q0P6D6 951 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 ALFQ53S48 1182 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 RNASE12Q5GAN4 147 aaKnown RBP6.72□□□□□ -1.33
HERC4-213ENST00000506515 AARS2Q5JTZ9 985 aaKnown RBP6.72□□□□□ -1.33
HERC4-213ENST00000506515 TSTD2Q5T7W7 516 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 MTHFD1LQ6UB35 978 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 Q6ZPA2 131 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 SYT13Q7L8C5 426 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 PAF1Q8N7H5 531 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 SLC9A6Q92581 669 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 PYM1Q9BRP8 204 aaKnown RBP6.72□□□□□ -1.33
HERC4-213ENST00000506515 CINPQ9BW66 212 aaPredicted RBP6.72□□□□□ -1.33
HERC4-213ENST00000506515 LIN7CQ9NUP9 197 aaKnown RBP6.72□□□□□ -1.33
HERC4-213ENST00000506515 NDUFAF4Q9P032 175 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 KCND3Q9UK17 655 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 RAB21Q9UL25 225 aa6.72□□□□□ -1.33
HERC4-213ENST00000506515 UBE2J1Q9Y385 318 aaPredicted RBP6.72□□□□□ -1.33
HERC4-213ENST00000506515 SETD1BQ9UPS6 1966 aaKnown RBP6.71□□□□□ -1.33
HERC4-213ENST00000506515 LOC105369274A0A096LPK9 316 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 LOC102723532A0A0G2JNH3 316 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 SLC38A8A6NNN8 435 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 GCOM1H8Y6P7 765 aaPredicted RBP6.71□□□□□ -1.34
HERC4-213ENST00000506515 MGST3O14880 152 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 EXOC3O60645 756 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 PRAMEF2O60811 474 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 CKMT1AP12532 417 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 KRT4P19013 534 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 DRD4P21917 467 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 CXCR5P32302 372 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 PAPOLAP51003 745 aaKnown RBP6.71□□□□□ -1.34
HERC4-213ENST00000506515 COPB1P53618 953 aaKnown RBP6.71□□□□□ -1.34
HERC4-213ENST00000506515 AAK1Q2M2I8 961 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 C16orf89Q6UX73 402 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 SFTPA1Q8IWL2 248 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 OR4N4Q8N0Y3 316 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 Q8N1X5 172 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 NPIPB3Q92617 1050 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 FAR2Q96K12 515 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 MMS19Q96T76 1030 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 MACROD1Q9BQ69 325 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 TOR3AQ9H497 397 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 CHODLQ9H9P2 273 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 TRPC5Q9UL62 973 aaPredicted RBP6.71□□□□□ -1.34
HERC4-213ENST00000506515 ZBTB1Q9Y2K1 713 aa6.71□□□□□ -1.34
HERC4-213ENST00000506515 LRRFIP2Q9Y608 721 aaKnown RBP6.71□□□□□ -1.34
HERC4-213ENST00000506515 RRN3P2A6NIE6 340 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 NCAM2O15394 837 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 FZD7O75084 574 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 CNTFP26441 200 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 GALNSP34059 522 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 RARRES1P49788 294 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 ACTR2P61160 394 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 CYP4F2P78329 520 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 GPC5P78333 572 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 RAE1P78406 368 aaKnown RBP6.7□□□□□ -1.34
HERC4-213ENST00000506515 PDCLQ13371 301 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 CBFBQ13951 182 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 ACSM6Q6P461 480 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 SYNE3Q6ZMZ3 975 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 SLC29A4Q7RTT9 530 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 HERC6Q8IVU3 1022 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 C12orf76Q8N812 135 aaPredicted RBP6.7□□□□□ -1.34
HERC4-213ENST00000506515 COG8Q96MW5 612 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 PRRX2Q99811 253 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 THAP7Q9BT49 309 aaPredicted RBP6.7□□□□□ -1.34
HERC4-213ENST00000506515 CIPCQ9C0C6 399 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 RIC8AQ9NPQ8 531 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 IL17RBQ9NRM6 502 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 RXFP3Q9NSD7 469 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 PACSIN3Q9UKS6 424 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 NEO1Q92859 1461 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 UGGT2Q9NYU1 1516 aa6.7□□□□□ -1.34
HERC4-213ENST00000506515 PCF11O94913 1555 aaKnown RBP6.69□□□□□ -1.34
HERC4-213ENST00000506515 RAPGEF2Q9Y4G8 1499 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 AGR2O95994 175 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 TK1P04183 234 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 JAK3P52333 1124 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 RBM5P52756 815 aaKnown RBP eCLIP6.69□□□□□ -1.34
HERC4-213ENST00000506515 FAM3BP58499 235 aaPredicted RBP6.69□□□□□ -1.34
HERC4-213ENST00000506515 FAM187BQ17R55 369 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 ZNF804AQ7Z570 1209 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 GRASPQ7Z6J2 395 aaPredicted RBP6.69□□□□□ -1.34
HERC4-213ENST00000506515 TERB1Q8NA31 727 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 CEP70Q8NHQ1 597 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D5Q92609 795 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 SDCCAG3Q96C92 435 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 EDC3Q96F86 508 aaKnown RBP6.69□□□□□ -1.34
HERC4-213ENST00000506515 EIF2AK1Q9BQI3 630 aaKnown RBP6.69□□□□□ -1.34
HERC4-213ENST00000506515 TFCP2L1Q9NZI6 479 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 SLC12A4Q9UP95 1085 aa6.69□□□□□ -1.34
HERC4-213ENST00000506515 ZCCHC11Q5TAX3 1644 aaKnown RBP6.68□□□□□ -1.34
HERC4-213ENST00000506515 DISP1Q96F81 1524 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D3DA0A087WVF3 549 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms