RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 UNC13DQ70J99 1090 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 RSRC2Q7L4I2 434 aaKnown RBP10.38□□□□□ -0.75
NEDD9-210ENST00000505589 EPM2AIP1Q7L775 607 aaPredicted RBP10.38□□□□□ -0.75
NEDD9-210ENST00000505589 CCDC117Q8IWD4 279 aaPredicted RBP10.38□□□□□ -0.75
NEDD9-210ENST00000505589 PDILTQ8N807 584 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 ZMIZ2Q8NF64 920 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 PIP4K2CQ8TBX8 421 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 FGF11Q92914 225 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 BHMTQ93088 406 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 WBP2Q969T9 261 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 PLD4Q96BZ4 506 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 WBP1Q96G27 269 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 FAXDC2Q96IV6 333 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 FAM84AQ96KN4 292 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 C7orf25Q9BPX7 421 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 DUSP16Q9BY84 665 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 PRORYQ9H606 182 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 SMYD3Q9H7B4 428 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 CD93Q9NPY3 652 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 FRMD4BQ9Y2L6 1034 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 KNTC1P50748 2209 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 ASXL3Q9C0F0 2248 aa10.38□□□□□ -0.75
NEDD9-210ENST00000505589 A0A1B0GTQ1 180 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 LRRC72A6NJI9 287 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 PLK4O00444 970 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 VILLO15195 856 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 PPP6R2O75170 966 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 RFPL3O75679 317 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 BEST1O76090 585 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 LATS1O95835 1130 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 PDIA4P13667 645 aaKnown RBP10.37□□□□□ -0.75
NEDD9-210ENST00000505589 CCDC130P13994 396 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 ADORA2BP29275 332 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 CORO1AP31146 461 aaKnown RBP10.37□□□□□ -0.75
NEDD9-210ENST00000505589 ACSL1P33121 698 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 HOXD13P35453 343 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 CTSKP43235 329 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 ST8SIA6P61647 398 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 E2F1Q01094 437 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 BNC1Q01954 994 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 CEBPZQ03701 1054 aaKnown RBP10.37□□□□□ -0.75
NEDD9-210ENST00000505589 FNDC3BQ53EP0 1204 aaKnown RBP10.37□□□□□ -0.75
NEDD9-210ENST00000505589 HS1BP3Q53T59 392 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 CCDC157Q569K6 752 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 CLEC20AQ6ZU45 233 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 FAM124AQ86V42 546 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 DENND1CQ8IV53 801 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 LSMEM2Q8N112 164 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 AHI1Q8N157 1196 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 C12orf29Q8N999 325 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 BIRC7Q96CA5 298 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 ERLEC1Q96DZ1 483 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 TMA16Q96EY4 203 aaKnown RBP10.37□□□□□ -0.75
NEDD9-210ENST00000505589 CNDP2Q96KP4 475 aaKnown RBP10.37□□□□□ -0.75
NEDD9-210ENST00000505589 ELF4Q99607 663 aaPredicted RBP10.37□□□□□ -0.75
NEDD9-210ENST00000505589 FGFBP2Q9BYJ0 223 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 RASAL2Q9UJF2 1139 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 AGO1Q9UL18 857 aaKnown RBP10.37□□□□□ -0.75
NEDD9-210ENST00000505589 USP3Q9Y6I4 520 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 PTPRBP23467 1997 aa10.37□□□□□ -0.75
NEDD9-210ENST00000505589 GOLGA4Q13439 2230 aaKnown RBP10.36□□□□□ -0.75
NEDD9-210ENST00000505589 A0A1W2PPC4 97 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 FAM149AA5PLN7 773 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 CYP26A1O43174 497 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 FSBPO95073 299 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 POLR2EP19388 210 aaKnown RBP10.36□□□□□ -0.75
NEDD9-210ENST00000505589 UCNP55089 124 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 SEMG2Q02383 582 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 EFEMP1Q12805 493 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 STK38Q15208 465 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 ZACNQ401N2 412 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 MPP7Q5T2T1 576 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 BROXQ5VW32 411 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 ZNF776Q68DI1 518 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-210ENST00000505589 SLC9A9Q8IVB4 645 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 NELFCDQ8IXH7 590 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 SNIP1Q8TAD8 396 aaKnown RBP10.36□□□□□ -0.75
NEDD9-210ENST00000505589 TMC2Q8TDI7 906 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 ZNF396Q96N95 335 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-210ENST00000505589 FCRL3Q96P31 734 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-210ENST00000505589 TMEM245Q9H330 911 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 C6orf106Q9H6K1 298 aaPredicted RBP10.36□□□□□ -0.75
NEDD9-210ENST00000505589 NMUR1Q9HB89 426 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 GDF3Q9NR23 364 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 FAM49BQ9NUQ9 324 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 OSER1Q9NX31 292 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 MARCH2Q9P0N8 246 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 BTBD3Q9Y2F9 522 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 HBS1LQ9Y450 684 aaKnown RBP10.36□□□□□ -0.75
NEDD9-210ENST00000505589 RAI2Q9Y5P3 530 aa10.36□□□□□ -0.75
NEDD9-210ENST00000505589 SHROOM3Q8TF72 1996 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 SLC12A8A0AV02 714 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 TYW5A2RUC4 315 aaKnown RBP10.35□□□□□ -0.75
NEDD9-210ENST00000505589 LRRIQ3A6PVS8 624 aaPredicted RBP10.35□□□□□ -0.75
NEDD9-210ENST00000505589 HHLA1C9JL84 531 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 H0Y8X5 98 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 ERVH48-1M5A8F1 160 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 ASS1P00966 412 aaKnown RBP10.35□□□□□ -0.75
NEDD9-210ENST00000505589 KLKB1P03952 638 aa10.35□□□□□ -0.75
NEDD9-210ENST00000505589 DLDP09622 509 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms