RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 BCAT2O15382 392 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 PRPF4O43172 522 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TGFB1I1O43294 461 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TNFSF14O43557 240 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZBTB14O43829 449 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 PSMD10O75832 226 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SASH1O94885 1247 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 IL18BPO95998 194 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 HMGCRP04035 888 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 MPOP05164 745 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 CYP21A2P08686 494 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 HMOX1P09601 288 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 COX7A2P14406 83 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TBXAS1P24557 533 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 CD6P30203 668 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC6A4P31645 630 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 CSF2RBP32927 897 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 ICAM3P32942 547 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TTKP33981 857 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 ARL1P40616 181 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 PNPLA4P41247 253 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 MTHFSP49914 203 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 STAT2P52630 851 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 EPHB3P54753 998 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 KRT76Q01546 638 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 AKAP17AQ02040 695 aaKnown RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 ACTN3Q08043 901 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 BFSP2Q13515 415 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 FRG1Q14331 258 aaKnown RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 IRF3Q14653 427 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 PRICKLE4Q2TBC4 344 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 CR1LQ2VPA4 569 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 PTCHD3Q3KNS1 767 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZSCAN23Q3MJ62 389 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 GKAP1Q5VSY0 366 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TAF2Q6P1X5 1199 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 FAM111BQ6SJ93 734 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 OLFM4Q6UX06 510 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 PIK3AP1Q6ZUJ8 805 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SEM1Q6ZVN7 128 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 NUP54Q7Z3B4 507 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 STK32CQ86UX6 486 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 AMIGO3Q86WK7 504 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 LDHDQ86WU2 507 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 PROSER1Q86XN7 944 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 MIB1Q86YT6 1006 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 RHPN2Q8IUC4 686 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 WDR63Q8IWG1 891 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZFPM1Q8IX07 1006 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TUSC5Q8IXB3 177 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TMEFF1Q8IYR6 380 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SAMD14Q8IZD0 417 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 LILRA3Q8N6C8 439 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 C11orf44Q8N8P7 122 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 DTX3Q8N9I9 347 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 LSM14AQ8ND56 463 aaKnown RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TMIEQ8NEW7 156 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 KCNE4Q8WWG9 221 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 PRPF31Q8WWY3 499 aaKnown RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 NKD2Q969F2 451 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 ARRDC3Q96B67 414 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 AK8Q96MA6 479 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 CLIC6Q96NY7 704 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TMEM209Q96SK2 561 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 GPR20Q99678 358 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 MESP1Q9BRJ9 268 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 PI4K2AQ9BTU6 479 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 NDC1Q9BTX1 674 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 HERC2P3Q9BVR0 1158 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 FUT8Q9BYC5 575 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TNMDQ9H2S6 317 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SERHL2Q9H4I8 314 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 C19orf44Q9H6X5 657 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 GBA2Q9HCG7 927 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TLR8Q9NR97 1041 aaKnown RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SNTG1Q9NSN8 517 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 FBXO28Q9NVF7 368 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 FBXO34Q9NWN3 711 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 DDX43Q9NXZ2 648 aaKnown RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 IL1RAPL1Q9NZN1 696 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SELENONQ9NZV5 590 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SUCLA2Q9P2R7 463 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 DNMT3BQ9UBC3 853 aaKnown RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC25A10Q9UBX3 287 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SEC63Q9UGP8 760 aaKnown RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TMEM59LQ9UK28 342 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TRPC5Q9UL62 973 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 MRPS17Q9Y2R5 130 aaKnown RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 RAXQ9Y2V3 346 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 HCFC2Q9Y5Z7 792 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 FPGT-TNNI3KV9GXZ4 949 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 KDM3AQ9Y4C1 1321 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZMYM3Q14202 1370 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 FRMD3A2A2Y4 597 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 C16orf96A6NNT2 1141 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 NRP1O14786 923 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZNF263O14978 683 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 SRGAP3O43295 1099 aa3.86□□□□□ -1.79
HMGB1P22-201ENST00000505315 TXNL1O43396 289 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms