RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TMEM215Q68D42 235 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 PMF1Q6P1K2 205 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 C11orf74Q86VG3 221 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 TRIM59Q8IWR1 403 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 TMEFF1Q8IYR6 380 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 DEFB119Q8N690 84 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 CEP63Q96MT8 703 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 CALCOCO1Q9P1Z2 691 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 SFMBT1Q9UHJ3 866 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 STARD13Q9Y3M8 1113 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 URB1O60287 2271 aaKnown RBP13.76□□□□□ -0.21
DDX41-204ENST00000504807 PLXND1Q9Y4D7 1925 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 SLC12A8A0AV02 714 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 J3QKU1 62 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 GFRA2O00451 464 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 CFIP05156 583 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 HOXB2P14652 356 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 NDUFV2P19404 249 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 ZNF132P52740 706 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 BCAT1P54687 386 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 MFAP3P55082 362 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 BST2Q10589 180 aaKnown RBP13.75□□□□□ -0.21
DDX41-204ENST00000504807 EOGTQ5NDL2 527 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 TMEM270Q6UE05 265 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 DENND1CQ8IV53 801 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 FAM217AQ8IXS0 508 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 SORCS1Q8WY21 1168 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 MYEOVQ96EZ4 313 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 CAMK1GQ96NX5 476 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 ACP6Q9NPH0 428 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 MARCH2Q9P0N8 246 aa13.75□□□□□ -0.21
DDX41-204ENST00000504807 LSM7Q9UK45 103 aaKnown RBP13.75□□□□□ -0.21
DDX41-204ENST00000504807 AJAP1Q9UKB5 411 aaPredicted RBP13.75□□□□□ -0.21
DDX41-204ENST00000504807 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
DDX41-204ENST00000504807 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX41-204ENST00000504807 MUC22E2RYF6 1773 aaPredicted RBP13.75□□□□□ -0.21
DDX41-204ENST00000504807 TK2O00142 265 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 PMM2O15305 246 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 FYNP06241 537 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 FTH1P19P0C7X4 201 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 RALAP11233 206 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 VDRP11473 427 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 LCP1P13796 627 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 NTSR1P30989 418 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 DGKGP49619 791 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 PSEN1P49768 467 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 DAOAP59103 153 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 TRIP4Q15650 581 aaPredicted RBP13.74□□□□□ -0.21
DDX41-204ENST00000504807 CCDC40Q4G0X9 1142 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 HSF5Q4G112 596 aaPredicted RBP13.74□□□□□ -0.21
DDX41-204ENST00000504807 BSPRYQ5W0U4 402 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 GJB7Q6PEY0 223 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 LCLAT1Q6UWP7 414 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 IRF2BP1Q8IU81 584 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 FMNL3Q8IVF7 1028 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 PPM1KQ8N3J5 372 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 ZNF843Q8N446 348 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 SLC35F5Q8WV83 523 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 ADAMTS14Q8WXS8 1223 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 PIWIL1Q96J94 861 aaKnown RBP13.74□□□□□ -0.21
DDX41-204ENST00000504807 GABRG3Q99928 467 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 WDR35Q9P2L0 1181 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 CYTH4Q9UIA0 394 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 THADAQ6YHU6 1953 aa13.74□□□□□ -0.21
DDX41-204ENST00000504807 NUP205Q92621 2012 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 IGHV1OR15-9A0A0B4J2B8 117 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 GOLGA6L7A0A1B0GV03 622 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 ATXN7O15265 892 aaPredicted RBP13.73□□□□□ -0.21
DDX41-204ENST00000504807 ARHGAP6O43182 974 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 TSPAN3O60637 253 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 OPHN1O60890 802 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 IL12RB1P42701 662 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 MARSP56192 900 aaKnown RBP13.73□□□□□ -0.21
DDX41-204ENST00000504807 KCNH2Q12809 1159 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 TRIP6Q15654 476 aaKnown RBP13.73□□□□□ -0.21
DDX41-204ENST00000504807 CAMK4Q16566 473 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 SYT12Q8IV01 421 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 SLC41A1Q8IVJ1 513 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 TTC39CQ8N584 583 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 EHBP1Q8NDI1 1231 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 OR2I1PQ8NGU4 316 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 CCDC26Q8TAB7 109 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 PIP4K2CQ8TBX8 421 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 WFDC5Q8TCV5 224 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 IPO4Q8TEX9 1081 aaKnown RBP13.73□□□□□ -0.21
DDX41-204ENST00000504807 KCTD13Q8WZ19 329 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 CCDC34Q96HJ3 373 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 NT5C1BQ96P26 610 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 SRRTQ9BXP5 876 aaKnown RBP13.73□□□□□ -0.21
DDX41-204ENST00000504807 INTS2Q9H0H0 1204 aaKnown RBP13.73□□□□□ -0.21
DDX41-204ENST00000504807 FAM124BQ9H5Z6 455 aaPredicted RBP13.73□□□□□ -0.21
DDX41-204ENST00000504807 METTL14Q9HCE5 456 aaKnown RBP13.73□□□□□ -0.21
DDX41-204ENST00000504807 POLMQ9NP87 494 aaPredicted RBP13.73□□□□□ -0.21
DDX41-204ENST00000504807 BCCIPQ9P287 314 aaKnown RBP eCLIP13.73□□□□□ -0.21
DDX41-204ENST00000504807 TJP2Q9UDY2 1190 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 PCDHB4Q9Y5E5 795 aa13.73□□□□□ -0.21
DDX41-204ENST00000504807 MYO18AQ92614 2054 aaKnown RBP13.72□□□□□ -0.21
DDX41-204ENST00000504807 M0QYV0 167 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 PAEPP09466 180 aa13.72□□□□□ -0.21
DDX41-204ENST00000504807 ITPKAP23677 461 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms