RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GDPD5Q8WTR4 605 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 RNF139Q8WU17 664 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 SEC14L1Q92503 715 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 ANKRD7Q92527 254 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 WBP2Q969T9 261 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 SERPINB11Q96P15 392 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 NAP1L3Q99457 506 aaPredicted RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 FAM118BQ9BPY3 351 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 EMILIN2Q9BXX0 1053 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 KLC2Q9H0B6 622 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 TKTL2Q9H0I9 626 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 SLITRK6Q9H5Y7 841 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 DHX35Q9H5Z1 703 aaKnown RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 CERS4Q9HA82 394 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 ARHGEF4Q9NR80 690 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPM3-217ENST00000504663 RCOR3Q9P2K3 495 aaPredicted RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 PCYOX1Q9UHG3 505 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 RAB21Q9UL25 225 aa10.78□□□□□ -0.68
TPM3-217ENST00000504663 MAGED2Q9UNF1 606 aaPredicted RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 KIF26AQ9ULI4 1882 aaPredicted RBP10.78□□□□□ -0.68
TPM3-217ENST00000504663 REV3LO60673 3130 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 NUP210Q8TEM1 1887 aaPredicted RBP10.77□□□□□ -0.69
TPM3-217ENST00000504663 C2orf78A6NCI8 922 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 PRRG1O14668 218 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 TP73O15350 636 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 TTI1O43156 1089 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 COCHO43405 550 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 LIASO43766 372 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 GREM1O60565 184 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 CST8O60676 142 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 PAGE1O75459 146 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 RFPL2O75678 378 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 F9P00740 461 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 POU2F2P09086 479 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 RHOXF2BP0C7M4 288 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 MYBL2P10244 700 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 H2AFXP16104 143 aaPredicted RBP10.77□□□□□ -0.69
TPM3-217ENST00000504663 CHRNA3P32297 505 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 CCR2P41597 374 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 ALDH1A3P47895 512 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 KCNJ1P48048 391 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 FNTAP49354 379 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 RGS19P49795 217 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 VSNL1P62760 191 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 ZXDBP98169 803 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 RBM10P98175 930 aaKnown RBP10.77□□□□□ -0.69
TPM3-217ENST00000504663 OTUD4Q01804 1114 aaKnown RBP10.77□□□□□ -0.69
TPM3-217ENST00000504663 NRG1Q02297 640 aaPredicted RBP10.77□□□□□ -0.69
TPM3-217ENST00000504663 EFEMP1Q12805 493 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 SLC10A2Q12908 348 aaPredicted RBP10.77□□□□□ -0.69
TPM3-217ENST00000504663 NOMO1Q15155 1222 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 TRADDQ15628 312 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 RAB30Q15771 203 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 CLUL1Q15846 466 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 CCNG2Q16589 344 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 NADSYN1Q6IA69 706 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 C14orf80Q86SX3 495 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 KCTD6Q8NC69 237 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 ACTL9Q8TC94 416 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 NKD2Q969F2 451 aaPredicted RBP10.77□□□□□ -0.69
TPM3-217ENST00000504663 ZNF707Q96C28 371 aaPredicted RBP10.77□□□□□ -0.69
TPM3-217ENST00000504663 HAUS1Q96CS2 278 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 MYEOVQ96EZ4 313 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 OLFM3Q96PB7 478 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 SLC22A12Q96S37 553 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 PRMT1Q99873 361 aaKnown RBP10.77□□□□□ -0.69
TPM3-217ENST00000504663 RHOXF2Q9BQY4 288 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 TRIM51Q9BSJ1 452 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 RNF38Q9H0F5 515 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 OSBPL2Q9H1P3 480 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 GDF3Q9NR23 364 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 MAN1C1Q9NR34 630 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 SAE1Q9UBE0 346 aaPredicted RBP10.77□□□□□ -0.69
TPM3-217ENST00000504663 ZNF212Q9UDV6 495 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 AMACRQ9UHK6 382 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 DNPEPQ9ULA0 475 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 TLR6Q9Y2C9 796 aa10.77□□□□□ -0.69
TPM3-217ENST00000504663 DENND4AQ7Z401 1863 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 COL4A3Q01955 1670 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 TARSL2A2RTX5 802 aaKnown RBP10.76□□□□□ -0.69
TPM3-217ENST00000504663 APOC4-APOC2K7ER74 178 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 MFSD11O43934 449 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 LRIG2O94898 1065 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 TJP3O95049 919 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 APOC2P02655 101 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 AMPD1P23109 780 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 KLRC2P26717 231 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 TNFRSF8P28908 595 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 HOXA9P31269 272 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 IRAK1P51617 712 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 EPHB3P54753 998 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 VCPP55072 806 aaKnown RBP10.76□□□□□ -0.69
TPM3-217ENST00000504663 DYNLT1P63172 113 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 SLC7A5Q01650 507 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 GBE1Q04446 702 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 RING1Q06587 406 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 KRT81Q14533 505 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 DUSP6Q16828 381 aa10.76□□□□□ -0.69
TPM3-217ENST00000504663 GLE1Q53GS7 698 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms