RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SLC18A1P54219 525 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 CARTPTQ16568 116 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 NFIL3Q16649 462 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 UNC5AQ6ZN44 842 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 CHSY1Q86X52 802 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 RCN3Q96D15 328 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 AGAP3Q96P47 875 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 NPAS2Q99743 824 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 TMEM79Q9BSE2 394 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 NUF2Q9BZD4 464 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 FOXP3Q9BZS1 431 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 RNF19AQ9NV58 838 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 GMPR2Q9P2T1 348 aaKnown RBP7.85□□□□□ -1.15
NEDD9-208ENST00000504387 FBXO40Q9UH90 709 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 POLIQ9UNA4 740 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 SSX2IPQ9Y2D8 614 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 TTLL3Q9Y4R7 772 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 STK24Q9Y6E0 443 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 TAF1LQ8IZX4 1826 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 TTC36A6NLP5 189 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 PLOD2O00469 737 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 ZBED1O96006 694 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 CCNE2O96020 404 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 ERVK-10P10266 1014 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 THRAP10827 490 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 COX4I1P13073 169 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 MMP8P22894 467 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 EIF4BP23588 611 aaKnown RBP7.85□□□□□ -1.15
NEDD9-208ENST00000504387 MLH1P40692 756 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 SLC18A2Q05940 514 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 RALGDSQ12967 914 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 SNAPC2Q13487 334 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 TCEAL1Q15170 157 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 HSP90AA5PQ58FG0 334 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 RARS2Q5T160 578 aaKnown RBP7.85□□□□□ -1.15
NEDD9-208ENST00000504387 MFSD4BQ5TF39 518 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 THNSL1Q8IYQ7 743 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 PIAS4Q8N2W9 510 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-208ENST00000504387 DCLK2Q8N568 766 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 DEPTORQ8TB45 409 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 FAM110BQ8TC76 370 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 ATP2A3Q93084 1043 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 SGF29Q96ES7 293 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 RPL10LQ96L21 214 aaKnown RBP7.85□□□□□ -1.15
NEDD9-208ENST00000504387 MSTO1Q9BUK6 570 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 IMPG2Q9BZV3 1241 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 COG4Q9H9E3 785 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 IL1RL2Q9HB29 575 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 INIPQ9NRY2 104 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 THAP1Q9NVV9 213 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 TMEM216Q9P0N5 145 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 ZNF70Q9UC06 446 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-208ENST00000504387 CDC14AQ9UNH5 594 aa7.85□□□□□ -1.15
NEDD9-208ENST00000504387 HMX2A2RU54 273 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 FAM149AA5PLN7 773 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 KRT38O76015 456 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 HMGCRP04035 888 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 CHRNGP07510 517 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 TFE3P19532 575 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 ACO1P21399 889 aaKnown RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 TYK2P29597 1187 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 HOXA10P31260 410 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 EMP3P54852 163 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 GCNT1Q02742 428 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 SLC10A2Q12908 348 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 PTP4A2Q12974 167 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 PTPN20Q4JDL3 420 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 TEX44Q53QW1 395 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 MTX3Q5HYI7 312 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 TEDDM1Q5T9Z0 273 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 MAP3K21Q5TCX8 1036 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 LGSNQ5TDP6 509 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 C15orf52Q6ZUT6 534 aaKnown RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 USP37Q86T82 979 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 SNX29P2Q8IUI4 249 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 TSPAN14Q8NG11 270 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 POLR3FQ9H1D9 316 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 GPAMQ9HCL2 828 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 SFMBT1Q9UHJ3 866 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 DRG1Q9Y295 367 aaKnown RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 SH3GLB1Q9Y371 365 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 TEX264Q9Y6I9 313 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 V9GYQ6 96 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 ARHGAP10A1A4S6 786 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 SAC3D1A6NKF1 404 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 A8MU76 341 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 C9JVG2 144 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 AGRPO00253 132 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 VIL1P09327 827 aaKnown RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 PSMC3P17980 439 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 CDH2P19022 906 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 UGT1A6P19224 532 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 MAGEA8P43361 318 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 YAP1P46937 504 aaKnown RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 NME5P56597 212 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 MRPS9P82933 396 aaKnown RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 ART3Q13508 389 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 HADHQ16836 314 aaKnown RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 SLC27A3Q5K4L6 730 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 C6orf183Q5T699 404 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms