RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ZDHHC11BP0C7U3 371 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 GNG10P50151 68 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 SF3B4Q15427 424 aaKnown RBP eCLIP6.41□□□□□ -1.389e-6■■□□□ 14.4
CLCN3-204ENST00000504131 MAPK11Q15759 364 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 SLFN12LQ6IEE8 588 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PAPD4Q6PIY7 484 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 KLHL24Q6TFL4 600 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 EIF3MQ7L2H7 374 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 MIGA2Q7L4E1 593 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 TRMT44Q8IYL2 757 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 ST8SIA2Q92186 375 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PIK3R3Q92569 461 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 FBXO32Q969P5 355 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 AK8Q96MA6 479 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 FRMD8Q9BZ67 464 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 SEMA4CQ9C0C4 833 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 MROH8Q9H579 483 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 DACT1Q9NYF0 836 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 SRRDQ9UH36 339 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 DERAQ9Y315 318 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 RGSL1A5PLK6 1076 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 RGS16O15492 202 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 OIP5O43482 229 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 GATCO43716 136 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 GADD45BO75293 160 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PIAS2O75928 621 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 COL6A1P12109 1028 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 NPR3P17342 541 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PSMA5P28066 241 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CAMK2BQ13554 666 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 ELOAQ14241 798 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 FGL2Q14314 439 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 KYNUQ16719 465 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PERM1Q5SV97 790 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF557Q8N988 423 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 SLC35B4Q969S0 331 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CHCHD6Q9BRQ6 235 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 OSBPL6Q9BZF3 934 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 QRSL1Q9H0R6 528 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 EVA1AQ9H8M9 152 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PNPLA8Q9NP80 782 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 IGSF5Q9NSI5 407 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 STK17AQ9UEE5 414 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 TRHDEQ9UKU6 1024 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 REREQ9P2R6 1566 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 GSTA4O15217 222 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 CTRB1P17538 263 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 C4BPBP20851 252 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 ATP6V1B2P21281 511 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 PTDSS1P48651 473 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 DYRK1AQ13627 763 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 THOC5Q13769 683 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 IDI1Q13907 227 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 FRG1Q14331 258 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 INTS11Q5TA45 600 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 TMEM164Q5U3C3 297 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 KIAA1614Q5VZ46 1190 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 CTRB2Q6GPI1 263 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 EFL1Q7Z2Z2 1120 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 MMAAQ8IVH4 418 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 SRFBP1Q8NEF9 429 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 FBXO22Q8NEZ5 403 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 BBS1Q8NFJ9 593 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 FNDC8Q8TC99 324 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 FNIP1Q8TF40 1166 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 HNRNPLLQ8WVV9 542 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 CLIC6Q96NY7 704 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 KCNH7Q9NS40 1196 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 NR2E1Q9Y466 385 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 ZMYM4Q5VZL5 1548 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 GYG2O15488 501 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 CST8O60676 142 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 AP2A1O95782 977 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 ALBP02768 609 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 PROS1P07225 676 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 RALBP11234 206 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 RPS2P15880 293 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 CASP4P49662 377 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 STAT5BP51692 787 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 AFF3P51826 1226 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 KPNA2P52292 529 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 DLG4P78352 724 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 KCNJ10P78508 379 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 CCDC85BQ15834 202 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 GSTA3Q16772 222 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 TNFAIP8L3Q5GJ75 292 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 FBXO31Q5XUX0 539 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 CCDC36Q8IYA8 594 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 TSPEARQ8WU66 669 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 TEKT3Q9BXF9 490 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 MKRN2Q9H000 416 aaKnown RBP6.4□□□□□ -1.38
CLCN3-204ENST00000504131 EPS8L2Q9H6S3 715 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 MORF4L1Q9UBU8 362 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 PCDHB4Q9Y5E5 795 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 ALG5Q9Y673 324 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 KCNE2Q9Y6J6 123 aa6.4□□□□□ -1.38
CLCN3-204ENST00000504131 CCNT2O60583 730 aaKnown RBP6.4□□□□□ -1.39
CLCN3-204ENST00000504131 ITGB1P05556 798 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 GSTM2P28161 218 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms