RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 MLKLQ8NB16 471 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 RBBP8NLQ8NC74 664 aaPredicted RBP12.48□□□□□ -0.41
MED28-203ENST00000503945 KAT5Q92993 513 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 GABRG3Q99928 467 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 TMEM9BQ9NQ34 198 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 ELOVL2Q9NXB9 296 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.48□□□□□ -0.41
MED28-203ENST00000503945 PLA2G4CQ9UP65 541 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 CACNA1GO43497 2377 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 SYNCRIPO60506 623 aaKnown RBP12.47□□□□□ -0.41
MED28-203ENST00000503945 TSPAN3O60637 253 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 CEACAM1P13688 526 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 CSRP1P21291 193 aaKnown RBP12.47□□□□□ -0.41
MED28-203ENST00000503945 BRD2P25440 801 aaKnown RBP12.47□□□□□ -0.41
MED28-203ENST00000503945 ACADSBP45954 432 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 SLC11A2P49281 568 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 RPL6Q02878 288 aaKnown RBP12.47□□□□□ -0.41
MED28-203ENST00000503945 ZNF252P-AS1Q0IIN9 211 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 TPD52L1Q16890 204 aaPredicted RBP12.47□□□□□ -0.41
MED28-203ENST00000503945 UAP1L1Q3KQV9 507 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 SYT12Q8IV01 421 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 ARHGEF19Q8IW93 802 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 PIWIL1Q96J94 861 aaKnown RBP12.47□□□□□ -0.41
MED28-203ENST00000503945 ZSWIM1Q9BR11 485 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 NUSAP1Q9BXS6 441 aaKnown RBP12.47□□□□□ -0.41
MED28-203ENST00000503945 MIS12Q9H081 205 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 INTS2Q9H0H0 1204 aaKnown RBP12.47□□□□□ -0.41
MED28-203ENST00000503945 ST7Q9NRC1 585 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 CACNA2D2Q9NY47 1150 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 THAP10Q9P2Z0 257 aaPredicted RBP12.47□□□□□ -0.41
MED28-203ENST00000503945 MBD1Q9UIS9 605 aaPredicted RBP12.47□□□□□ -0.41
MED28-203ENST00000503945 ZMIZ1Q9ULJ6 1067 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 CNTN6Q9UQ52 1028 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 STON1Q9Y6Q2 735 aa12.47□□□□□ -0.41
MED28-203ENST00000503945 CEP295Q9C0D2 2601 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 SART1O43290 800 aaKnown RBP12.46□□□□□ -0.41
MED28-203ENST00000503945 NDUFS2O75306 463 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 GABBR2O75899 941 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 LETM1O95202 739 aaPredicted RBP12.46□□□□□ -0.41
MED28-203ENST00000503945 LATS1O95835 1130 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 LTFP02788 710 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 NCAM1P13591 858 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 USP8P40818 1118 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 PTGER3P43115 390 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 GPD2P43304 727 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 LMAN2Q12907 356 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 EIF4HQ15056 248 aaKnown RBP12.46□□□□□ -0.41
MED28-203ENST00000503945 GEN1Q17RS7 908 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 LYSMD4Q5XG99 296 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 NUGGCQ68CJ6 796 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 KIAA1211LQ6NV74 962 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 UNQ6494/PRO21346Q6UXR6 183 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 GBP6Q6ZN66 633 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 ARMCX6Q7L4S7 300 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 BHLHA9Q7RTU4 235 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 ANKS1BQ7Z6G8 1248 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 FAM217AQ8IXS0 508 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 DEFB119Q8N690 84 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 KDF1Q8NAX2 398 aaPredicted RBP12.46□□□□□ -0.41
MED28-203ENST00000503945 CEP76Q8TAP6 659 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 ZNF606Q8WXB4 792 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 AZIN2Q96A70 460 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 ERLEC1Q96DZ1 483 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 MRGPRX1Q96LB2 322 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 KREMEN1Q96MU8 473 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 MED15Q96RN5 788 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 DDX50Q9BQ39 737 aaKnown RBP12.46□□□□□ -0.41
MED28-203ENST00000503945 CRACR2AQ9BSW2 395 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 CIPCQ9C0C6 399 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 TMEM74BQ9NUR3 256 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 CALCOCO1Q9P1Z2 691 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 STOML2Q9UJZ1 356 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 RAD54BQ9Y620 910 aa12.46□□□□□ -0.41
MED28-203ENST00000503945 PLXND1Q9Y4D7 1925 aa12.46□□□□□ -0.42
MED28-203ENST00000503945 CAPN9O14815 690 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 CALCAP01258 141 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 NDUFV2P19404 249 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 TBX4P57082 545 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 ZNF33AQ06730 810 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 TRIM61Q5EBN2 209 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 TMPRSS6Q8IU80 811 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 CCDC117Q8IWD4 279 aaPredicted RBP12.45□□□□□ -0.42
MED28-203ENST00000503945 DEFB124Q8NES8 71 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 STK32AQ8WU08 396 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 P2RY11Q96G91 374 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 TRIM62Q9BVG3 475 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 SCNM1Q9BWG6 230 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
MED28-203ENST00000503945 IRX2Q9BZI1 471 aaPredicted RBP12.45□□□□□ -0.42
MED28-203ENST00000503945 PRDM16Q9HAZ2 1276 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 ITM2CQ9NQX7 267 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 CLEC4EQ9ULY5 219 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 CYP8B1Q9UNU6 501 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 MYH10P35580 1976 aa12.45□□□□□ -0.42
MED28-203ENST00000503945 IRAK2O43187 625 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 MSI1O43347 362 aaKnown RBP12.44□□□□□ -0.42
MED28-203ENST00000503945 ATP5BP06576 529 aaKnown RBP12.44□□□□□ -0.42
MED28-203ENST00000503945 SLC9A1P19634 815 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 ITPKAP23677 461 aa12.44□□□□□ -0.42
MED28-203ENST00000503945 OXTRP30559 389 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms