RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 XPO6Q96QU8 1125 aaKnown RBP22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 TRIM62Q9BVG3 475 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 PPANQ9NQ55 473 aaKnown RBP22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 PAK6Q9NQU5 681 aaPredicted RBP22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 FETUBQ9UGM5 382 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 RABGEF1Q9UJ41 708 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 VWA8A3KMH1 1905 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 IGLV3-25P01717 112 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 OR4Q2P0C623 313 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 CREB1P16220 341 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 HTRA3P83110 453 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 EIF4EBP2Q13542 120 aaPredicted RBP22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 PRKD1Q15139 912 aaPredicted RBP22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 ARL13BQ3SXY8 428 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 CAPN12Q6ZSI9 719 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 FAM43BQ6ZT52 329 aaPredicted RBP22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 TADA2BQ86TJ2 420 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 HTR3CQ8WXA8 447 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 TBK1Q9UHD2 729 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 PCDHB7Q9Y5E2 793 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 ACTL7BQ9Y614 415 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 TEX264Q9Y6I9 313 aa22.06■■□□□ 1.12
UBE2D3-216ENST00000503742 GMNCA6NCL1 334 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 SYN3O14994 580 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 METTL18O95568 372 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 SSTR1P30872 391 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 PHBP35232 272 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 SLC5A3P53794 718 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 SLC39A12Q504Y0 691 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 FAXCQ5TGI0 409 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 VSTM1Q6UX27 236 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 TAC4Q86UU9 113 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 IGDCC3Q8IVU1 814 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 MCUQ8NE86 351 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 DQX1Q8TE96 717 aaKnown RBP22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 CASD1Q96PB1 797 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 CCT8L2Q96SF2 557 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 SLC24A2Q9UI40 661 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 TET1Q8NFU7 2136 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 NDUFAB1O14561 156 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 GRIK1P39086 918 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 C3orf62Q6ZUJ4 267 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 DCP1BQ8IZD4 617 aaKnown RBP22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 LGMNQ99538 433 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 WDCPQ9H6R7 721 aa22.05■■□□□ 1.12
UBE2D3-216ENST00000503742 FOXO6A8MYZ6 492 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 TADA2AO75478 443 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 FAM107AO95990 144 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 ERCC2P18074 760 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 TPSB2P20231 275 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 ELK3P41970 407 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 GLUD2P49448 558 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 ZNF135P52742 658 aaPredicted RBP22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 MTM1Q13496 603 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 PDK1Q15118 436 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 TPSAB1Q15661 275 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 TCTN1Q2MV58 587 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 SYCP2LQ5T4T6 812 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 CAND1Q86VP6 1230 aaKnown RBP22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 PALM2Q8IXS6 379 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 VPS52Q8N1B4 723 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 CRIPAKQ8N1N5 446 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 AGGF1Q8N302 714 aaeCLIP22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 SEPT8Q92599 483 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 FUBP3Q96I24 572 aaKnown RBP eCLIP22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 TKTL2Q9H0I9 626 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 ACSS3Q9H6R3 686 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 TTC3P53804 2025 aa22.04■■□□□ 1.12
UBE2D3-216ENST00000503742 A0A0A0MRY4 1105 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 POC1B-GALNT4F8VUJ3 575 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 YWHAGP61981 247 aaKnown RBP eCLIP22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 MRPL58Q14197 206 aaKnown RBP22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 TMED2Q15363 201 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 VARS2Q5ST30 1063 aaKnown RBP22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 ABI1Q8IZP0 508 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 APBB2Q92870 758 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 SPATA13Q96N96 652 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 INTS9Q9NV88 658 aaKnown RBP22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 CHMP2BQ9UQN3 213 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 APRTP07741 180 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 CCT5P48643 541 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 TPI1P60174 286 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 NR1H3Q13133 447 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 SEMA5AQ13591 1074 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 NFE2Q16621 373 aaPredicted RBP22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 ANKRD20A2Q5SQ80 823 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 ANKRD20A1Q5TYW2 823 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 ANKRD20A3Q5VUR7 823 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 FBF1Q8TES7 1133 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 DHRS4Q9BTZ2 278 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 PRDM12Q9H4Q4 367 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 CCDC134Q9H6E4 229 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 ABCC13Q9NSE7 274 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 ADAM28Q9UKQ2 775 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 NR2E3Q9Y5X4 410 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 RAD54BQ9Y620 910 aa22.03■■□□□ 1.12
UBE2D3-216ENST00000503742 TMEM120BA0PK00 339 aa22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 AVILO75366 819 aa22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 MAGEA3P43357 314 aa22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 GATMP50440 423 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms