RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 DCUN1D2Q6PH85 259 aa17.14■□□□□ 0.33
SCLT1-205ENST00000503401 C12orf40Q86WS4 652 aa17.14■□□□□ 0.33
SCLT1-205ENST00000503401 NAT16Q8N8M0 369 aa17.14■□□□□ 0.33
SCLT1-205ENST00000503401 FAM3CQ92520 227 aa17.14■□□□□ 0.33
SCLT1-205ENST00000503401 PBXIP1Q96AQ6 731 aa17.14■□□□□ 0.33
SCLT1-205ENST00000503401 PACSIN1Q9BY11 444 aa17.14■□□□□ 0.33
SCLT1-205ENST00000503401 C8orf33Q9H7E9 229 aaPredicted RBP17.14■□□□□ 0.33
SCLT1-205ENST00000503401 PARVAQ9NVD7 372 aa17.14■□□□□ 0.33
SCLT1-205ENST00000503401 RRN3Q9NYV6 651 aa17.14■□□□□ 0.33
SCLT1-205ENST00000503401 PLK2Q9NYY3 685 aa17.14■□□□□ 0.33
SCLT1-205ENST00000503401 NDRG2Q9UN36 371 aaKnown RBP17.14■□□□□ 0.33
SCLT1-205ENST00000503401 NEDD8-MDP1E9PL57 170 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 TSPAN3O60637 253 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 ADH1CP00326 375 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 APOEP02649 317 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 GPD1P21695 349 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 SDC4P31431 198 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 OGDHQ02218 1023 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 DEUP1Q05D60 604 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 NR1H3Q13133 447 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 UBXN2BQ14CS0 331 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 CWF19L1Q69YN2 538 aaKnown RBP17.13■□□□□ 0.33
SCLT1-205ENST00000503401 RFWD3Q6PCD5 774 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 ZNF852Q6ZMS4 543 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 RALGPS2Q86X27 583 aaPredicted RBP17.13■□□□□ 0.33
SCLT1-205ENST00000503401 SHDQ96IW2 340 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 BBS2Q9BXC9 721 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 TRIM7Q9C029 511 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 ANLNQ9NQW6 1124 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 TMPRSS4Q9NRS4 437 aa17.13■□□□□ 0.33
SCLT1-205ENST00000503401 KANSL1LA0AUZ9 987 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 ACSL4O60488 711 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 TARSP26639 723 aaKnown RBP17.12■□□□□ 0.33
SCLT1-205ENST00000503401 SLC6A4P31645 630 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 CCR1P32246 355 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 CHKAP35790 457 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 SLC6A11P48066 632 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 SLC11A2P49281 568 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 SGSHP51688 502 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 GALCP54803 685 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 FAM133BQ5BKY9 247 aaKnown RBP17.12■□□□□ 0.33
SCLT1-205ENST00000503401 ADGRF1Q5T601 910 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.12■□□□□ 0.33
SCLT1-205ENST00000503401 FAM131BQ86XD5 332 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 ARHGEF26Q96DR7 871 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 MYEOVQ96EZ4 313 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 TRIM11Q96F44 468 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 PGAP3Q96FM1 320 aaPredicted RBP17.12■□□□□ 0.33
SCLT1-205ENST00000503401 PANX2Q96RD6 677 aa17.12■□□□□ 0.33
SCLT1-205ENST00000503401 FBRSL1Q9HCM7 1045 aaKnown RBP17.12■□□□□ 0.33
SCLT1-205ENST00000503401 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCLT1-205ENST00000503401 KIAA1549LQ6ZVL6 1849 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 KCNU1A8MYU2 1149 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 I6L893 689 aaPredicted RBP17.11■□□□□ 0.33
SCLT1-205ENST00000503401 CCP110O43303 1012 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 MYBL1P10243 752 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 TYRP14679 529 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 GLULP15104 373 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 RDXP35241 583 aaKnown RBP17.11■□□□□ 0.33
SCLT1-205ENST00000503401 GGCXP38435 758 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 OPRD1P41143 372 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 CXCR3P49682 368 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 GAD2Q05329 585 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 MESP2Q0VG99 397 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 BNIPLQ7Z465 357 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 FAM217AQ8IXS0 508 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 FAM172AQ8WUF8 416 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 TKTL2Q9H0I9 626 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 WDCPQ9H6R7 721 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 LTB4R2Q9NPC1 389 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 IMPACTQ9P2X3 320 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 STOML2Q9UJZ1 356 aa17.11■□□□□ 0.33
SCLT1-205ENST00000503401 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 TRIM24O15164 1050 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 PI15O43692 258 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 LATS1O95835 1130 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 PTPN9P43378 593 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 GALK1P51570 392 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 ZNF143P52747 638 aaPredicted RBP17.1■□□□□ 0.33
SCLT1-205ENST00000503401 MLLT6P55198 1093 aaPredicted RBP17.1■□□□□ 0.33
SCLT1-205ENST00000503401 PPP2R5DQ14738 602 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 RAP1GAP2Q684P5 730 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 SND1Q7KZF4 910 aaKnown RBP eCLIP17.1■□□□□ 0.33
SCLT1-205ENST00000503401 CPXM2Q8N436 756 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 ATP6V0D2Q8N8Y2 350 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 DDI1Q8WTU0 396 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 BTN2A3PQ96KV6 586 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 SNX10Q9Y5X0 201 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 ANKRD62A6NC57 917 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 TMEM191CA6NGB0 347 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 FAM170BA6NMN3 283 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 HOXC11O43248 304 aaPredicted RBP17.1■□□□□ 0.33
SCLT1-205ENST00000503401 F9P00740 461 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 DCNP07585 359 aaKnown RBP17.1■□□□□ 0.33
SCLT1-205ENST00000503401 SLC2A3P11169 496 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 HDAC4P56524 1084 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 ZNF252P-AS1Q0IIN9 211 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 TMEM31Q5JXX7 168 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 PIK3R6Q5UE93 754 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms