RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 TM9SF3Q9HD45 589 aa13.64□□□□□ -0.23
TRIO-205ENST00000503399 EXOC1Q9NV70 894 aa13.64□□□□□ -0.23
TRIO-205ENST00000503399 CLIC5Q9NZA1 410 aa13.64□□□□□ -0.23
TRIO-205ENST00000503399 MARCH2Q9P0N8 246 aa13.64□□□□□ -0.23
TRIO-205ENST00000503399 ANKRD6Q9Y2G4 727 aa13.64□□□□□ -0.23
TRIO-205ENST00000503399 KNL1Q8NG31 2342 aa13.64□□□□□ -0.23
TRIO-205ENST00000503399 CABIN1Q9Y6J0 2220 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 TSPAN3O60637 253 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 DKK1O94907 266 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 SEMA4FO95754 770 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 NR3C1P04150 777 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 INAVAQ3KP66 663 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 FOXD4L6Q3SYB3 417 aaPredicted RBP13.63□□□□□ -0.23
TRIO-205ENST00000503399 ZNF394Q53GI3 561 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 PPP1R26Q5T8A7 1209 aaPredicted RBP13.63□□□□□ -0.23
TRIO-205ENST00000503399 FOXD4L5Q5VV16 416 aaPredicted RBP13.63□□□□□ -0.23
TRIO-205ENST00000503399 DHRS13Q6UX07 377 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 FOXD4L3Q6VB84 417 aaPredicted RBP13.63□□□□□ -0.23
TRIO-205ENST00000503399 PDCD7Q8N8D1 485 aaKnown RBP13.63□□□□□ -0.23
TRIO-205ENST00000503399 PIP4K2CQ8TBX8 421 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 FOXD4L4Q8WXT5 416 aaPredicted RBP13.63□□□□□ -0.23
TRIO-205ENST00000503399 ARID3AQ99856 593 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 DUSP16Q9BY84 665 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 DNAI2Q9GZS0 605 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 MMRN2Q9H8L6 949 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 DMAC2Q9NW81 257 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 FTSJ1Q9UET6 329 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 FRMD4BQ9Y2L6 1034 aa13.63□□□□□ -0.23
TRIO-205ENST00000503399 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.63□□□□□ -0.23
TRIO-205ENST00000503399 BPTFQ12830 3046 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 H0Y8X5 98 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 TIMM44O43615 452 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 YEATS4O95619 227 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 DNTTP04053 509 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 TRIM49P0CI25 452 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 TRIM49CP0CI26 452 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 ABCG1P45844 678 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 GRIA4P48058 902 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 STK4Q13043 487 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 CAMK2BQ13554 666 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 CAMK2GQ13555 558 aaPredicted RBP13.62□□□□□ -0.23
TRIO-205ENST00000503399 SLC9A9Q8IVB4 645 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 SCUBE3Q8IX30 993 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 CEP57L1Q8IYX8 460 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 ARHGAP18Q8N392 663 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 CPXM2Q8N436 756 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 ZNF276Q8N554 614 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 RBBP8NLQ8NC74 664 aaPredicted RBP13.62□□□□□ -0.23
TRIO-205ENST00000503399 KIAA0895Q8NCT3 520 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 IGSF8Q969P0 613 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 BIRC7Q96CA5 298 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 HEXIM2Q96MH2 286 aaKnown RBP13.62□□□□□ -0.23
TRIO-205ENST00000503399 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 SLC2A11Q9BYW1 496 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 NIF3L1Q9GZT8 377 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 BTBD1Q9H0C5 482 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 CYP3A43Q9HB55 503 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 APOBEC3GQ9HC16 384 aaKnown RBP13.62□□□□□ -0.23
TRIO-205ENST00000503399 FAM13BQ9NYF5 915 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 PLA2G4CQ9UP65 541 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 USP3Q9Y6I4 520 aa13.62□□□□□ -0.23
TRIO-205ENST00000503399 A0A087WV48 116 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 FAM47DPA6NHR8 397 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 PLK4O00444 970 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 IKBKBO14920 756 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 PRB1P04280 392 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 HOXD9P28356 352 aaPredicted RBP13.61□□□□□ -0.23
TRIO-205ENST00000503399 GCLMP48507 274 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 VAMP7P51809 220 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 YWHAGP61981 247 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRIO-205ENST00000503399 SMAD1Q15797 465 aaKnown RBP13.61□□□□□ -0.23
TRIO-205ENST00000503399 PTPRNQ16849 979 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 TTC31Q49AM3 519 aaPredicted RBP13.61□□□□□ -0.23
TRIO-205ENST00000503399 MPPE1Q53F39 396 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 C1orf220Q5T0J3 134 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 CHST9Q7L1S5 443 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 CCDC150Q8NCX0 1101 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 TAS1R2Q8TE23 839 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 GANCQ8TET4 914 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 PLD4Q96BZ4 506 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 KCTD10Q9H3F6 313 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 ABCB8Q9NUT2 735 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 ASXL3Q9C0F0 2248 aa13.61□□□□□ -0.23
TRIO-205ENST00000503399 PDXKO00764 312 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 KLRC4O43908 158 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 CD27P26842 260 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 HLA-FP30511 346 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 ME1P48163 572 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 HARS2P49590 506 aaKnown RBP13.6□□□□□ -0.23
TRIO-205ENST00000503399 BCAT1P54687 386 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 CLDN6P56747 220 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 C21orf59P57076 290 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 RPS14P62263 151 aaKnown RBP13.6□□□□□ -0.23
TRIO-205ENST00000503399 KMT5BQ4FZB7 885 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 KCNT1Q5JUK3 1230 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 PIGZQ86VD9 579 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 ADAM32Q8TC27 787 aa13.6□□□□□ -0.23
TRIO-205ENST00000503399 WFIKKN2Q8TEU8 576 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms