RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 PCDH19Q8TAB3 1148 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 CAVIN3Q969G5 261 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 BTN2A3PQ96KV6 586 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 TGS1Q96RS0 853 aaKnown RBP9.4□□□□□ -0.9
NR1I3-216ENST00000502848 FERMT1Q9BQL6 677 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 HERPUD2Q9BSE4 406 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 HEMGNQ9BXL5 484 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 CRISPLD1Q9H336 500 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 VIPAS39Q9H9C1 493 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 NMUR1Q9HB89 426 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 CYP4F11Q9HBI6 524 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 PCDH9Q9HC56 1237 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 EPB41L5Q9HCM4 733 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 TLR9Q9NR96 1032 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 TRPM5Q9NZQ8 1165 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 GMIPQ9P107 970 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 CALCOCO1Q9P1Z2 691 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 WHRNQ9P202 907 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 NEU2Q9Y3R4 380 aa9.4□□□□□ -0.9
NR1I3-216ENST00000502848 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 C2orf71A6NGG8 1288 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 EEF2KO00418 725 aaKnown RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 C2CD2LO14523 706 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 TLR5O60602 858 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 SEC24AO95486 1093 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 CXCL14O95715 111 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 GLUD1P00367 558 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 CD48P09326 243 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 CNPP09543 421 aaKnown RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 HNRNPA1P09651 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 RARGP13631 454 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 KRT10P13645 584 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 SYN1P17600 705 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ITIH2P19823 946 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ATP5C1P36542 298 aaKnown RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 GPR15P49685 360 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ERVK-21P61565 698 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 USP46P62068 366 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 PITX1P78337 314 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 COG7P83436 770 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 GUCY2DQ02846 1103 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 CALCOCO2Q13137 446 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 PPP1R7Q15435 360 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 RAB30Q15771 203 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ZC3H12AQ5D1E8 599 aaKnown RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 PPP6R3Q5H9R7 873 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 MANEALQ5VSG8 457 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 KAZNQ674X7 775 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 RFX8Q6ZV50 586 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 TMC7Q7Z402 723 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ANKS1BQ7Z6G8 1248 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 PCGF5Q86SE9 256 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ELMOD1Q8N336 334 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 MREGQ8N565 214 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 PQLC3Q8N755 202 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ACTL9Q8TC94 416 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 SPPL3Q8TCT6 385 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 AENQ8WTP8 325 aaKnown RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 NDRG1Q92597 394 aaKnown RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 EDEM1Q92611 657 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 DPF3Q92784 378 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 CASP10Q92851 521 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 PLD4Q96BZ4 506 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 SNF8Q96H20 258 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 KLHL5Q96PQ7 755 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 KCTD15Q96SI1 283 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 TCF25Q9BQ70 676 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 FRMD8Q9BZ67 464 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 TKTL2Q9H0I9 626 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ARHGEF4Q9NR80 690 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 KLHL11Q9NVR0 708 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 CWC15Q9P013 229 aaKnown RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 PPARGC1AQ9UBK2 798 aaKnown RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 OR12D3Q9UGF7 316 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 DNMT3LQ9UJW3 386 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ZMYND8Q9ULU4 1186 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 R3HDM2Q9Y2K5 976 aaKnown RBP9.39□□□□□ -0.91
NR1I3-216ENST00000502848 SLC27A5Q9Y2P5 690 aa9.39□□□□□ -0.91
NR1I3-216ENST00000502848 ZNF840PA6NDX5 716 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 H3BNC9 293 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 PPP1R12AO14974 1030 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 DCLK1O15075 740 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 TGM5O43548 720 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 OLFM2O95897 454 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 OAS1P00973 400 aaKnown RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 RBP3P10745 1247 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 MX2P20592 715 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 DDX6P26196 483 aaKnown RBP eCLIP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 KLRC2P26717 231 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 CDC25CP30307 473 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 MAGEA10P43363 369 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 EPHA5P54756 1037 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 MLLT6P55198 1093 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-216ENST00000502848 TBX4P57082 545 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 TPI1P60174 286 aa9.38□□□□□ -0.91
NR1I3-216ENST00000502848 EIF3EP60228 445 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms