RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ADCY5O95622 1261 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 F9P00740 461 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 SLC2A3P11169 496 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 EIF2DP41214 584 aaKnown RBP26.09■■□□□ 1.77
LSM6-202ENST00000502781 PTPN9P43378 593 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 SLC11A2P49281 568 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 SULT1E1P49888 294 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 MAMLD1Q13495 774 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 FAM133BQ5BKY9 247 aaKnown RBP26.09■■□□□ 1.77
LSM6-202ENST00000502781 TMEM196Q5HYL7 178 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 NAIF1Q69YI7 327 aaPredicted RBP26.09■■□□□ 1.77
LSM6-202ENST00000502781 ALKBH5Q6P6C2 394 aaKnown RBP26.09■■□□□ 1.77
LSM6-202ENST00000502781 CCDC105Q8IYK2 499 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 RXFP2Q8WXD0 754 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 CFAP57Q96MR6 1250 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 CHP1Q99653 195 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 PIGVQ9NUD9 493 aa26.09■■□□□ 1.77
LSM6-202ENST00000502781 FAM170BA6NMN3 283 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 PENKP01210 267 aaPredicted RBP26.08■■□□□ 1.77
LSM6-202ENST00000502781 APOEP02649 317 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 MYBL1P10243 752 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 PDGFRAP16234 1089 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 CCR1P32246 355 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 CXCR3P49682 368 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 VCPP55072 806 aaKnown RBP26.08■■□□□ 1.77
LSM6-202ENST00000502781 NME3Q13232 169 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 PON2Q15165 354 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 SLC18A3Q16572 532 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 CCDC14Q49A88 953 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 NADSYN1Q6IA69 706 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 TPGS1Q6ZTW0 290 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 CENPIQ92674 756 aaPredicted RBP26.08■■□□□ 1.77
LSM6-202ENST00000502781 CLDN23Q96B33 292 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 TRIM11Q96F44 468 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 BTN2A3PQ96KV6 586 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 IRX2Q9BZI1 471 aaPredicted RBP26.08■■□□□ 1.77
LSM6-202ENST00000502781 PARVAQ9NVD7 372 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 SIT1Q9Y3P8 196 aa26.08■■□□□ 1.77
LSM6-202ENST00000502781 PI15O43692 258 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 GALK1P51570 392 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 RPL7AP62424 266 aaKnown RBP26.07■■□□□ 1.76
LSM6-202ENST00000502781 UBXN2BQ14CS0 331 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 FYB2Q5VWT5 728 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 C12orf40Q86WS4 652 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 CD101Q93033 1021 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 P2RY13Q9BPV8 354 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 BBS2Q9BXC9 721 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 FBRSL1Q9HCM7 1045 aaKnown RBP26.07■■□□□ 1.76
LSM6-202ENST00000502781 DLGAP2Q9P1A6 1054 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 XPO7Q9UIA9 1087 aaKnown RBP26.07■■□□□ 1.76
LSM6-202ENST00000502781 NDRG2Q9UN36 371 aaKnown RBP26.07■■□□□ 1.76
LSM6-202ENST00000502781 MYOFQ9NZM1 2061 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 SYNJ2BP-COX16A0A087WUM0 186 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 STK25O00506 426 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 ATMINO43313 823 aaPredicted RBP26.07■■□□□ 1.76
LSM6-202ENST00000502781 CACNG3O60359 315 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 CHRNB1P11230 501 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 SDC4P31431 198 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 GFPT1Q06210 699 aaPredicted RBP26.07■■□□□ 1.76
LSM6-202ENST00000502781 MTA1Q13330 715 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 CCINQ13939 588 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 ANO4Q32M45 955 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 PHTF2Q8N3S3 785 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 MCEEQ96PE7 176 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 NHEJ1Q9H9Q4 299 aaPredicted RBP26.07■■□□□ 1.76
LSM6-202ENST00000502781 ARHGEF38Q9NXL2 777 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 COX16Q9P0S2 106 aa26.07■■□□□ 1.76
LSM6-202ENST00000502781 CNOT8Q9UFF9 292 aaKnown RBP26.07■■□□□ 1.76
LSM6-202ENST00000502781 TYRP14679 529 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 GPD1P21695 349 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 SLC6A4P31645 630 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 DEUP1Q05D60 604 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 BRMS1LQ5PSV4 323 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 CCDC122Q5T0U0 273 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 RNF43Q68DV7 783 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 FSTL4Q6MZW2 842 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 SUGP1Q8IWZ8 645 aaKnown RBP26.06■■□□□ 1.76
LSM6-202ENST00000502781 TMEM105Q8N8V8 129 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 ATP6V0D2Q8N8Y2 350 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 ZNF653Q96CK0 615 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 FBXO10Q9UK96 956 aa26.06■■□□□ 1.76
LSM6-202ENST00000502781 GOLGA6L7A0A1B0GV03 622 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 NEDD8-MDP1E9PL57 170 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 I6L893 689 aaPredicted RBP26.05■■□□□ 1.76
LSM6-202ENST00000502781 MOCS2O96007 188 aaPredicted RBP26.05■■□□□ 1.76
LSM6-202ENST00000502781 ABCB4P21439 1286 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 FECHP22830 423 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 AVPR2P30518 371 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 RDXP35241 583 aaKnown RBP26.05■■□□□ 1.76
LSM6-202ENST00000502781 RPS9P46781 194 aaKnown RBP26.05■■□□□ 1.76
LSM6-202ENST00000502781 SLC6A11P48066 632 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 ZNF143P52747 638 aaPredicted RBP26.05■■□□□ 1.76
LSM6-202ENST00000502781 ATXN1P54253 815 aaKnown RBP26.05■■□□□ 1.76
LSM6-202ENST00000502781 ATP11AP98196 1134 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 C15orf59Q2T9L4 293 aaPredicted RBP26.05■■□□□ 1.76
LSM6-202ENST00000502781 PIK3R6Q5UE93 754 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 STRADAQ7RTN6 431 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.05■■□□□ 1.76
LSM6-202ENST00000502781 RNF34Q969K3 372 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 EXOC4Q96A65 974 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms