RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CLEC20AQ6ZU45 233 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 GPR155Q7Z3F1 870 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 OR2T3Q8NH03 318 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 PLEKHO2Q8TD55 490 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 BAP1Q92560 729 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 SLC6A18Q96N87 628 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 BTBD1Q9H0C5 482 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 GZF1Q9H116 711 aaPredicted RBP9.57□□□□□ -0.88
CCDC171-209ENST00000498725 MTG2Q9H4K7 406 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 CSNK1G1Q9HCP0 422 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 AGO1Q9UL18 857 aaKnown RBP9.57□□□□□ -0.88
CCDC171-209ENST00000498725 ASXL3Q9C0F0 2248 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 FLNBO75369 2602 aaKnown RBP9.56□□□□□ -0.88
CCDC171-209ENST00000498725 KALRNO60229 2985 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 SLC12A8A0AV02 714 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 LRRIQ3A6PVS8 624 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-209ENST00000498725 HHLA1C9JL84 531 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 E9PAM4 449 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 BRINP1O60477 761 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 EXOC3O60645 756 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 VNN1O95497 513 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 STAU1O95793 577 aaKnown RBP9.56□□□□□ -0.88
CCDC171-209ENST00000498725 DNTTP04053 509 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 RALAP11233 206 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 KRT10P13645 584 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 CD27P26842 260 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 CASP1P29466 404 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 CHKAP35790 457 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 BCAT1P54687 386 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 RPS14P62263 151 aaKnown RBP9.56□□□□□ -0.88
CCDC171-209ENST00000498725 NCOA4Q13772 614 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 GSE1Q14687 1217 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 FAM26FQ5R3K3 315 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 CHST9Q7L1S5 443 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 SCD5Q86SK9 330 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 ZNF507Q8TCN5 953 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 CYFIP2Q96F07 1278 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 ACE2Q9BYF1 805 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-209ENST00000498725 PCED1AQ9H1Q7 454 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 AASDHPPTQ9NRN7 309 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 ZNF510Q9Y2H8 683 aa9.56□□□□□ -0.88
CCDC171-209ENST00000498725 CABIN1Q9Y6J0 2220 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 A0A1B0GTQ1 180 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 EIF3DO15371 548 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC171-209ENST00000498725 WNT1P04628 370 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 NEFLP07196 543 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 CD58P19256 250 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 COG7P83436 770 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 BNIP3Q12983 259 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 CAMK2GQ13555 558 aaPredicted RBP9.55□□□□□ -0.88
CCDC171-209ENST00000498725 BMT2Q1RMZ1 405 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 PCSK4Q6UW60 755 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 KDM7AQ6ZMT4 941 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 RSRC2Q7L4I2 434 aaKnown RBP9.55□□□□□ -0.88
CCDC171-209ENST00000498725 EPM2AIP1Q7L775 607 aaPredicted RBP9.55□□□□□ -0.88
CCDC171-209ENST00000498725 TWNKQ96RR1 684 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 LGMNQ99538 433 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 DCLK3Q9C098 648 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 SLC39A2Q9NP94 309 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 PRSS16Q9NQE7 514 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 ABCB8Q9NUT2 735 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 PLA2G4CQ9UP65 541 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 PCDHA5Q9Y5H7 936 aa9.55□□□□□ -0.88
CCDC171-209ENST00000498725 KNL1Q8NG31 2342 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 TEX51A0A1B0GUA7 166 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 C4BPAP04003 597 aaKnown RBP9.54□□□□□ -0.88
CCDC171-209ENST00000498725 IGHV4-34P06331 123 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 P4HA1P13674 534 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 GLDCP23378 1020 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 PIK3CAP42336 1068 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 ACADVLP49748 655 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 VASPP50552 380 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-209ENST00000498725 KIF11P52732 1056 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 DLG4P78352 724 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 LY6DQ14210 128 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 EIF4HQ15056 248 aaKnown RBP9.54□□□□□ -0.88
CCDC171-209ENST00000498725 RABEP1Q15276 862 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 E2F5Q15329 346 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 SHBQ15464 509 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 TTC31Q49AM3 519 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-209ENST00000498725 ZNF394Q53GI3 561 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 ARHGAP40Q5TG30 622 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 KIAA0895LQ68EN5 471 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 KLHDC10Q6PID8 442 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 TADA2BQ86TJ2 420 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 SPACA3Q8IXA5 215 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 CRYBG2Q8N1P7 616 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 RBBP8NLQ8NC74 664 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-209ENST00000498725 PARD3BQ8TEW8 1205 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 FGF11Q92914 225 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 MARVELD3Q96A59 401 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 DHX58Q96C10 678 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 TMEM176AQ96HP8 235 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 ELF4Q99607 663 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-209ENST00000498725 BLZF1Q9H2G9 400 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 CPNE5Q9HCH3 593 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 OSGEPQ9NPF4 335 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 MARCH2Q9P0N8 246 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 NCKAP1Q9Y2A7 1128 aa9.54□□□□□ -0.88
CCDC171-209ENST00000498725 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms