RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 WDCPQ9H6R7 721 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 TMPRSS4Q9NRS4 437 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 KLHL11Q9NVR0 708 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 ZKSCAN5Q9Y2L8 839 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 NUMBLQ9Y6R0 609 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 NYNRINQ9P2P1 1898 aaKnown RBP14.08□□□□□ -0.16
CPNE1-227ENST00000498056 FTCDO95954 541 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 SLC2A3P11169 496 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 COMTP21964 271 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 IFNAR2P48551 515 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 SLC11A2P49281 568 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 CXCR3P49682 368 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 VCPP55072 806 aaKnown RBP14.08□□□□□ -0.16
CPNE1-227ENST00000498056 PPP2R5DQ14738 602 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 ACAP1Q15027 740 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 HADHQ16836 314 aaKnown RBP14.08□□□□□ -0.16
CPNE1-227ENST00000498056 ARL13BQ3SXY8 428 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 EFHC2Q5JST6 749 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 TANGO2Q6ICL3 276 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 PARM1Q6UWI2 310 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 VITQ6UXI7 678 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 ZNF662Q6ZS27 426 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 UNC45BQ8IWX7 931 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 REXO1L1PQ8IX06 675 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 YAF2Q8IY57 180 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 SYCE1Q8N0S2 351 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 SLC39A13Q96H72 371 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 CALR3Q96L12 384 aaKnown RBP14.08□□□□□ -0.16
CPNE1-227ENST00000498056 NCAPGQ9BPX3 1015 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 SNRNP25Q9BV90 132 aaKnown RBP14.08□□□□□ -0.16
CPNE1-227ENST00000498056 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.08□□□□□ -0.16
CPNE1-227ENST00000498056 GPATCH2LQ9NWQ4 482 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 XPO7Q9UIA9 1087 aaKnown RBP14.08□□□□□ -0.16
CPNE1-227ENST00000498056 USP18Q9UMW8 372 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 AP4E1Q9UPM8 1137 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 WNT6Q9Y6F9 365 aa14.08□□□□□ -0.16
CPNE1-227ENST00000498056 E2F8A0AVK6 867 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 ENDOD1O94919 500 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 TCF3P15923 654 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 WEE1P30291 646 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 PCK1P35558 622 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 SLC1A1P43005 524 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 DNA2P51530 1060 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 SLC25A11Q02978 314 aaKnown RBP14.07□□□□□ -0.16
CPNE1-227ENST00000498056 EIF4EBP2Q13542 120 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-227ENST00000498056 HTR4Q13639 388 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 RAP1GAP2Q684P5 730 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 SLFN11Q7Z7L1 901 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 CHSY1Q86X52 802 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 BBS7Q8IWZ6 715 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 RNF10Q8N5U6 811 aaKnown RBP14.07□□□□□ -0.16
CPNE1-227ENST00000498056 ARFGAP1Q8N6T3 406 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 LRRC57Q8N9N7 239 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 KIAA1524Q8TCG1 905 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 HSPH1Q92598 858 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 ELSPBP1Q96BH3 223 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 BTN2A3PQ96KV6 586 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 IRX2Q9BZI1 471 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-227ENST00000498056 DCLK3Q9C098 648 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 TRPV4Q9HBA0 871 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 ARHGEF38Q9NXL2 777 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 OBP2AQ9NY56 170 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 SLC12A6Q9UHW9 1150 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 SNX10Q9Y5X0 201 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 CHD5Q8TDI0 1954 aa14.07□□□□□ -0.16
CPNE1-227ENST00000498056 KCNU1A8MYU2 1149 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 KIF5CO60282 957 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 ACSL4O60488 711 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 PAGE1O75459 146 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 ECI2O75521 394 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 KLKB1P03952 638 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 KRT1P04264 644 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 IL1R2P27930 398 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 TAS2R40P59535 323 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 KCNT1Q5JUK3 1230 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 Q6ZNB5 142 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 PEX26Q7Z412 305 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 PLCD3Q8N3E9 789 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 TRIM58Q8NG06 486 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 DEPDC1BQ8WUY9 529 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 RSAD2Q8WXG1 361 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 NTAN1Q96AB6 310 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 E2F7Q96AV8 911 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 ZFYVE19Q96K21 471 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 DHX35Q9H5Z1 703 aaKnown RBP14.06□□□□□ -0.16
CPNE1-227ENST00000498056 ANLNQ9NQW6 1124 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPNE1-227ENST00000498056 TMEM51Q9NW97 253 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 AGO1Q9UL18 857 aaKnown RBP14.06□□□□□ -0.16
CPNE1-227ENST00000498056 FZD10Q9ULW2 581 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 PACSIN2Q9UNF0 486 aaPredicted RBP14.06□□□□□ -0.16
CPNE1-227ENST00000498056 ALG6Q9Y672 507 aa14.06□□□□□ -0.16
CPNE1-227ENST00000498056 NUP205Q92621 2012 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 F5H5T6 163 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 I6L893 689 aaPredicted RBP14.05□□□□□ -0.16
CPNE1-227ENST00000498056 PSTPIP1O43586 416 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 GREM1O60565 184 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 LATS1O95835 1130 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 KRT7P08729 469 aa14.05□□□□□ -0.16
CPNE1-227ENST00000498056 ADRA1BP35368 520 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms