RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 CSF2RAP15509 400 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 IVDP26440 423 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 CHKAP35790 457 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 GLUD2P49448 558 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 BASP1P80723 227 aaKnown RBP8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 GBE1Q04446 702 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 IFFO1Q0D2I5 559 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 GPR17Q13304 367 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 DPYSQ14117 519 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 BTG3Q14201 252 aaPredicted RBP8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 MORF4L2Q15014 288 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 DDR2Q16832 855 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 USP41Q3LFD5 358 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 SLC45A4Q5BKX6 768 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 BRMS1LQ5PSV4 323 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 CEP85LQ5SZL2 805 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 HIBCHQ6NVY1 386 aaPredicted RBP8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 MSANTD2Q6P1R3 559 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 DENND5BQ6ZUT9 1274 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 RFX8Q6ZV50 586 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 HOOK3Q86VS8 718 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 ZCCHC9Q8N567 271 aaKnown RBP8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 COLGALT1Q8NBJ5 622 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 ATAD1Q8NBU5 361 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 PIK3R5Q8WYR1 880 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 RNF34Q969K3 372 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 FBXO32Q969P5 355 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 TRIM43Q96BQ3 446 aaPredicted RBP8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 IGSF21Q96ID5 467 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 SERPINB11Q96P15 392 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 SH3GL2Q99962 352 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 FOXP3Q9BZS1 431 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 TSPYL1Q9H0U9 437 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 C10orf88Q9H8K7 445 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 PRDM16Q9HAZ2 1276 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 DNAJC17Q9NVM6 304 aaKnown RBP8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 CWC15Q9P013 229 aaKnown RBP8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 GMIPQ9P107 970 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 SCML2Q9UQR0 700 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 MFHAS1Q9Y4C4 1052 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 CDY1Q9Y6F8 540 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 SCN8AQ9UQD0 1980 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 ZNF106Q9H2Y7 1883 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 WDR27A2RRH5 827 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 GOLGA6CA6NDK9 693 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 ZBBXA8MT70 800 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 C2CD2LO14523 706 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 PPP1R12AO14974 1030 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 RIPK2O43353 540 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 SOAT2O75908 522 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 SYF2O95926 243 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 SOD2P04179 222 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 NUDT17P0C025 328 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 GOLGA6DP0CG33 693 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 ACRP10323 421 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 HAPLN1P10915 354 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 CAPN2P17655 700 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 AMPD1P23109 780 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 IL4RP24394 825 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 SERPINB6P35237 376 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 PPM1AP35813 382 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 NR2C2P49116 596 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 CXCR3P49682 368 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 ZNF135P52742 658 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 EIF3BP55884 814 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 RPL10AP62906 217 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 ZNF844Q08AG5 666 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 SEMA3BQ13214 749 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 XRCC4Q13426 336 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 KRT71Q3SY84 523 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 RNASEH2BQ5TBB1 312 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 HEATR6Q6AI08 1181 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 MFSD5Q6N075 450 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 KIAA1841Q6NSI8 718 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 KCNT2Q6UVM3 1135 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 RSPO2Q6UXX9 243 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 RNF19BQ6ZMZ0 732 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 B4GALNT4Q76KP1 1039 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 TRMT10CQ7L0Y3 403 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 TMCO2Q7Z6W1 182 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 PCGF5Q86SE9 256 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 UNC45BQ8IWX7 931 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 PPIL6Q8IXY8 311 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 RNF168Q8IYW5 571 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 SLC39A11Q8N1S5 342 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 FAM71DQ8N9W8 422 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 OR2W6PQ8NHA6 318 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 PRCCQ92733 491 aaPredicted RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 TOP1MTQ969P6 601 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 VWCEQ96DN2 955 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 OLFM3Q96PB7 478 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 YME1L1Q96TA2 773 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 VN1R3Q9BXE9 311 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 TKTL2Q9H0I9 626 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 PABPC3Q9H361 631 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 NMUR1Q9HB89 426 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 AAASQ9NRG9 546 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 OLA1Q9NTK5 396 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 GOLGA6AQ9NYA3 693 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 DTLQ9NZJ0 730 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms