RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 CSHL1Q14406 222 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 TTLL4Q14679 1199 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 STILQ15468 1287 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.38□□□□□ -1.23
MACF1-226ENST00000497964 PABPC5Q96DU9 382 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 VPS50Q96JG6 964 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 DNAJC1Q96KC8 554 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 TNIP3Q96KP6 325 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 RNF157Q96PX1 679 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 TUBGCP5Q96RT8 1024 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 ATXN3LQ9H3M9 355 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 EBF3Q9H4W6 596 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 XPNPEP3Q9NQH7 507 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 PRMT7Q9NVM4 692 aaPredicted RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 DDIT4Q9NX09 232 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 SLC7A8Q9UHI5 535 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 ZNRF3Q9ULT6 936 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 ACOT9Q9Y305 439 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 IGKV6D-41A0A0C4DH26 115 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 TCRBV7S3A2A0A539 114 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 RNF103O00237 685 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 ABLIM1O14639 778 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 VTNP04004 478 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 COX4I1P13073 169 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 CNTFP26441 200 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 RPL5P46777 297 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 HSPA13P48723 471 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 RTP1P59025 263 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 TSTA3Q13630 321 aaPredicted RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 ATP1A4Q13733 1029 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 POU6F1Q14863 301 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 XRRA1Q6P2D8 792 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 C4orf22Q6V702 233 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 C15orf52Q6ZUT6 534 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 SAMD3Q8N6K7 520 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 DDHD1Q8NEL9 900 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 NKD2Q969F2 451 aaPredicted RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 CPXM1Q96SM3 734 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 P2RX7Q99572 595 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 CPSF3Q9UKF6 684 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 VANGL2Q9ULK5 521 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 PIN4Q9Y237 131 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 UBIAD1Q9Y5Z9 338 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 COMMD3-BMI1R4GMX3 469 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 A0A087WZ62 844 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 C15orf38-AP3S2A0A0A6YYH1 394 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 CHADO15335 359 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 TIMM44O43615 452 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 PGK2P07205 417 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 UQCRBP14927 111 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 ZNF23P17027 643 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 ABCE1P61221 599 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 OTUD3Q5T2D3 398 aaPredicted RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 TSHZ1Q6ZSZ6 1077 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 ARPINQ7Z6K5 226 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 C12orf29Q8N999 325 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 BANPQ8N9N5 519 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 APPL2Q8NEU8 664 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 PPHLN1Q8NEY8 458 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 DCPSQ96C86 337 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 TUBGCP3Q96CW5 907 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 APBA2Q99767 749 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 FDXACB1Q9BRP7 624 aaPredicted RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 NMRAL1Q9HBL8 299 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 S100A14Q9HCY8 104 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 COL20A1Q9P218 1284 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 AP4B1Q9Y6B7 739 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 SNED1Q8TER0 1413 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 ARFGEF2Q9Y6D5 1785 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 MYPNQ86TC9 1320 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 ADGRA2Q96PE1 1338 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 PFDN6O15212 129 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 SNX2O60749 519 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 TRUB2O95900 331 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 BPGMP07738 259 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 GJB1P08034 283 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 LINGO3P0C6S8 592 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 KCNA2P16389 499 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 CDC16Q13042 620 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 DCTN2Q13561 401 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 NEDD8Q15843 81 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 LY6KQ17RY6 165 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 PPM1JQ5JR12 505 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 TRMT10BQ6PF06 316 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 TMC7Q7Z402 723 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 AMIGO2Q86SJ2 522 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 VSIG10LQ86VR7 867 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 GIPC2Q8TF65 315 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 RMND5BQ96G75 393 aaPredicted RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 CELF6Q96J87 481 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 MBOAT7Q96N66 472 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 LGMNQ99538 433 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 EBNA1BP2Q99848 306 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 OMDQ99983 421 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 BEGAINQ9BUH8 593 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 SNRNP25Q9BV90 132 aaKnown RBP7.38□□□□□ -1.23
MACF1-226ENST00000497964 EPB41L4BQ9H329 900 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 SMARCAD1Q9H4L7 1026 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 WDR41Q9HAD4 459 aa7.38□□□□□ -1.23
MACF1-226ENST00000497964 APOBEC3GQ9HC16 384 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms