RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 SEC23BQ15437 767 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 PFKFB4Q16877 469 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 ZACNQ401N2 412 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 TMEM196Q5HYL7 178 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 TMEM63BQ5T3F8 832 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 MIS18BP1Q6P0N0 1132 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 TLDC1Q6P9B6 456 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 CCDC174Q6PII3 467 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 VSTM1Q6UX27 236 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 KIAA0408Q6ZU52 694 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 NRSN1Q8IZ57 195 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 METTL25Q8N6Q8 603 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 C16orf52Q8NHV5 167 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 SUN3Q8TAQ9 357 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 POLR3GLQ9BT43 218 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 EFHD1Q9BUP0 239 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 PPCSQ9HAB8 311 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 DACT1Q9NYF0 836 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 PCDHB2Q9Y5E7 798 aa3.76□□□□□ -1.81
PSPC1-205ENST00000497722 LGALS16A8MUM7 142 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 TRIM38O00635 465 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 TPD52L2O43399 206 aaKnown RBP3.75□□□□□ -1.81
PSPC1-205ENST00000497722 KCNQ3O43525 872 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 TCEA3O75764 348 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 TNFRSF6BO95407 300 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 ARP10275 920 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 MMP8P22894 467 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 HOXD9P28356 352 aaPredicted RBP3.75□□□□□ -1.81
PSPC1-205ENST00000497722 IL6STP40189 918 aaPredicted RBP3.75□□□□□ -1.81
PSPC1-205ENST00000497722 POLE2P56282 527 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 LARS2Q15031 903 aaKnown RBP3.75□□□□□ -1.81
PSPC1-205ENST00000497722 TWIST1Q15672 202 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 ZRSR2Q15696 482 aaKnown RBP3.75□□□□□ -1.81
PSPC1-205ENST00000497722 TIGD6Q17RP2 521 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 C4orf46Q504U0 113 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 C10orf25Q5T742 122 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 GORABQ5T7V8 394 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 ANKRD40Q6AI12 368 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 DEF8Q6ZN54 512 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 CNGA4Q8IV77 575 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 PNPLA1Q8N8W4 532 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 FAM71BQ8TC56 605 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 HMCESQ96FZ2 354 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 VCPIP1Q96JH7 1222 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 RMDN3Q96TC7 470 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 FAM118BQ9BPY3 351 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 ADGRE3Q9BY15 652 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 ARL8BQ9NVJ2 186 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 VPS51Q9UID3 782 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 MAFFQ9ULX9 164 aa3.75□□□□□ -1.81
PSPC1-205ENST00000497722 HMX3A6NHT5 357 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 TMEM232C9JQI7 657 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 DNPH1O43598 174 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 CNOT3O75175 753 aaKnown RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 FGBP02675 491 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 CSTBP04080 98 aaKnown RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 TMIGD3P0DMS9 266 aaPredicted RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 NPPBP16860 134 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 MCM5P33992 734 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 IGHMBP2P38935 993 aaKnown RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 PPM1FP49593 454 aaPredicted RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 LINC00205P59089 165 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 CFHR1Q03591 330 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 DEUP1Q05D60 604 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 PRKG1Q13976 671 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 KCNB1Q14721 858 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 MFSD13AQ14CX5 517 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 PFKFB3Q16875 520 aaPredicted RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 AWAT1Q58HT5 328 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 ANKRD45Q5TZF3 282 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 CCDC144NLQ6NUI1 221 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 ZNF517Q6ZMY9 492 aaPredicted RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 DCDC5Q6ZRR9 648 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 IRF2BP2Q7Z5L9 587 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 MYCT1Q8N699 235 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 C12orf76Q8N812 135 aaPredicted RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 NRACQ8N912 160 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 MAFAQ8NHW3 353 aaPredicted RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 STYXQ8WUJ0 223 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 MAP4K1Q92918 833 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 C3orf49Q96BT1 292 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 REXO5Q96IC2 774 aaKnown RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 FAR2Q96K12 515 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 SCLT1Q96NL6 688 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 NUDT22Q9BRQ3 303 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 WACQ9BTA9 647 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 CCDC134Q9H6E4 229 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 TRNAU1APQ9NX07 287 aaKnown RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 SEMA5BQ9P283 1151 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 IGSF9Q9P2J2 1179 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 ASAP1Q9ULH1 1129 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 HEMK1Q9Y5R4 338 aaPredicted RBP3.74□□□□□ -1.81
PSPC1-205ENST00000497722 COL15A1P39059 1388 aa3.74□□□□□ -1.81
PSPC1-205ENST00000497722 CLIC1O00299 241 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 SOCS2O14508 198 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 FYB1O15117 783 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 NBNO60934 754 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 ANXA6P08133 673 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 CBSLP0DN79 551 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms