RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TCF3P15923 654 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 FCARP24071 287 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 PTPN9P43378 593 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 ZNF143P52747 638 aaPredicted RBP20.84■□□□□ 0.93
CTSD-206ENST00000497544 PITX1P78337 314 aaPredicted RBP20.84■□□□□ 0.93
CTSD-206ENST00000497544 ZXDBP98169 803 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 ATP11AP98196 1134 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 DEUP1Q05D60 604 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 NNTQ13423 1086 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 HTR4Q13639 388 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 CC2D1AQ6P1N0 951 aaPredicted RBP20.84■□□□□ 0.93
CTSD-206ENST00000497544 MFSD6LQ8IWD5 586 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 RHOT2Q8IXI1 618 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 YAF2Q8IY57 180 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 SLC35G2Q8TBE7 412 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 ZNF564Q8TBZ8 553 aaPredicted RBP20.84■□□□□ 0.93
CTSD-206ENST00000497544 RSAD2Q8WXG1 361 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 NT5C3BQ969T7 300 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 PLD4Q96BZ4 506 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 DESI2Q9BSY9 194 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 CNPY3Q9BT09 278 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 DCLK3Q9C098 648 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 RALYQ9UKM9 306 aaKnown RBP20.84■□□□□ 0.93
CTSD-206ENST00000497544 OTOGLQ3ZCN5 2332 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 E2F8A0AVK6 867 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 MYO1FO00160 1098 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 TFE3P19532 575 aaPredicted RBP20.83■□□□□ 0.93
CTSD-206ENST00000497544 PSMA2P25787 234 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 HARS2P49590 506 aaKnown RBP20.83■□□□□ 0.93
CTSD-206ENST00000497544 CDO1Q16878 200 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 C15orf59Q2T9L4 293 aaPredicted RBP20.83■□□□□ 0.93
CTSD-206ENST00000497544 VITQ6UXI7 678 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 UNC45BQ8IWX7 931 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 UBALD2Q8IYN6 164 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 DEPDC1BQ8WUY9 529 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 RFFLQ8WZ73 363 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 RSPRY1Q96DX4 576 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 PGAP3Q96FM1 320 aaPredicted RBP20.83■□□□□ 0.93
CTSD-206ENST00000497544 ZNF830Q96NB3 372 aaPredicted RBP20.83■□□□□ 0.93
CTSD-206ENST00000497544 RPP25Q9BUL9 199 aaKnown RBP20.83■□□□□ 0.93
CTSD-206ENST00000497544 PLA2G2FQ9BZM2 168 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 KCNK12Q9HB15 430 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.83■□□□□ 0.93
CTSD-206ENST00000497544 SLC12A6Q9UHW9 1150 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 ANAPC7Q9UJX3 599 aa20.83■□□□□ 0.93
CTSD-206ENST00000497544 REXO2Q9Y3B8 237 aaKnown RBP20.83■□□□□ 0.93
CTSD-206ENST00000497544 IGLV3-25P01717 112 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 LMNAP02545 664 aaKnown RBP20.82■□□□□ 0.92
CTSD-206ENST00000497544 SLC2A3P11169 496 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 PSMC3P17980 439 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 NOP2P46087 812 aaKnown RBP20.82■□□□□ 0.92
CTSD-206ENST00000497544 VAV2P52735 878 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 RING1Q06587 406 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 USP4Q13107 963 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 ZNF77Q15935 545 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 NUGGCQ68CJ6 796 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 STRADAQ7RTN6 431 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 FNIP1Q8TF40 1166 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 LRRC3BQ96PB8 259 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 TRIM7Q9C029 511 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 WDCPQ9H6R7 721 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 IP6K2Q9UHH9 426 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 SORCS3Q9UPU3 1222 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 ZNF510Q9Y2H8 683 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 PAXBP1Q9Y5B6 917 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 ADGRG1Q9Y653 693 aa20.82■□□□□ 0.92
CTSD-206ENST00000497544 CCP110O43303 1012 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 RNF8O76064 485 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 ENDOD1O94919 500 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 APOEP02649 317 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 CCR1P32246 355 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 RDXP35241 583 aaKnown RBP20.81■□□□□ 0.92
CTSD-206ENST00000497544 CLCN5P51795 746 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 OGDHQ02218 1023 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 KIF5AQ12840 1032 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 EIF4EBP2Q13542 120 aaPredicted RBP20.81■□□□□ 0.92
CTSD-206ENST00000497544 GRM2Q14416 872 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 PIGHQ14442 188 aaPredicted RBP20.81■□□□□ 0.92
CTSD-206ENST00000497544 ANGPT1Q15389 498 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 ZC3H12AQ5D1E8 599 aaKnown RBP20.81■□□□□ 0.92
CTSD-206ENST00000497544 HTR3DQ70Z44 454 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 FAM172AQ8WUF8 416 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 SLC39A13Q96H72 371 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 FCRL2Q96LA5 508 aaPredicted RBP20.81■□□□□ 0.92
CTSD-206ENST00000497544 TRMT61BQ9BVS5 477 aaKnown RBP20.81■□□□□ 0.92
CTSD-206ENST00000497544 OSGEPQ9NPF4 335 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 TBC1D14Q9P2M4 693 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 TFR2Q9UP52 801 aa20.81■□□□□ 0.92
CTSD-206ENST00000497544 SLC9A3R1O14745 358 aaPredicted RBP20.8■□□□□ 0.92
CTSD-206ENST00000497544 ASGR2P07307 311 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 CORO1AP31146 461 aaKnown RBP20.8■□□□□ 0.92
CTSD-206ENST00000497544 IFNAR2P48551 515 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 ACAP1Q15027 740 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 ARHGAP29Q52LW3 1261 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 SH3PXD2AQ5TCZ1 1133 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 CWF19L1Q69YN2 538 aaKnown RBP20.8■□□□□ 0.92
CTSD-206ENST00000497544 DENND1CQ8IV53 801 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 SLC44A3Q8N4M1 653 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 KIAA1958Q8N8K9 716 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 ATP6V0D2Q8N8Y2 350 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms