RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 BCAT1P54687 386 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 ZBTB16Q05516 673 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 GEN1Q17RS7 908 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 ZNF394Q53GI3 561 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 MPP7Q5T2T1 576 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 DENND1CQ8IV53 801 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 DDI1Q8WTU0 396 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 RNF139Q8WU17 664 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 KIAA1522Q9P206 1035 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 HESX1Q9UBX0 185 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 PLA2G4CQ9UP65 541 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 COQ4Q9Y3A0 265 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 PCDHGB2Q9Y5G2 931 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 ASPMQ8IZT6 3477 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 SLC12A8A0AV02 714 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 BCAT2O15382 392 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 TOP3BO95985 862 aaKnown RBP17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 TKTL1P51854 596 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 GRIK2Q13002 908 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 ZNF234Q14588 700 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 COBLL1Q53SF7 1204 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 SERPINA13PQ6UXR4 307 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 RBBP8NLQ8NC74 664 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 GPR174Q9BXC1 333 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 LRRC4Q9HBW1 653 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 OSGEPQ9NPF4 335 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 RMND1Q9NWS8 449 aa17.61■□□□□ 0.41
TRAPPC3-207ENST00000497251 FASNP49327 2511 aaKnown RBP17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 DMXL2Q8TDJ6 3036 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 SLC16A3O15427 465 aaKnown RBP17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 SH3BP5O60239 455 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 TBXAS1P24557 533 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 BST2Q10589 180 aaKnown RBP17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 CAMK2GQ13555 558 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 SUZ12Q15022 739 aaKnown RBP17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 SGO2Q562F6 1265 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 ADGRF1Q5T601 910 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 NAXDQ8IW45 347 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 OR2T3Q8NH03 318 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 KCTD13Q8WZ19 329 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 GOLGA1Q92805 767 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 SEMA4DQ92854 862 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 TMA16Q96EY4 203 aaKnown RBP17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 IPO9Q96P70 1041 aaKnown RBP17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 CDC6Q99741 560 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 CIPCQ9C0C6 399 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 MMRN2Q9H8L6 949 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 FSCN3Q9NQT6 498 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 CNGB3Q9NQW8 809 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 ABCC13Q9NSE7 274 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 KLK13Q9UKR3 277 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 MAPK8IP1Q9UQF2 711 aa17.6■□□□□ 0.41
TRAPPC3-207ENST00000497251 AKAP13Q12802 2813 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 CKAP5Q14008 2032 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 ZNF202O95125 648 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 ATP5BP06576 529 aaKnown RBP17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 HMBSP08397 361 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 SETSIPP0DME0 302 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 MATKP42679 507 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 COPAP53621 1224 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 FKBP3Q00688 224 aaKnown RBP17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 SFSWAPQ12872 951 aaKnown RBP17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 DCAF12L1Q5VU92 463 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 DBX2Q6ZNG2 339 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 CHCHD4Q8N4Q1 142 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 TSG101Q99816 390 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 SLC6A17Q9H1V8 727 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 ADAMTS9Q9P2N4 1935 aa17.59■□□□□ 0.41
TRAPPC3-207ENST00000497251 KCNJ18B7U540 433 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 IRAK2O43187 625 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 CBFA2T3O75081 653 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 EPHX1P07099 455 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 PRR29P0C7W0 189 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 VDRP11473 427 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 AFF3P51826 1226 aaKnown RBP17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 CUL2Q13617 745 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 STILQ15468 1287 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 TEAD4Q15561 434 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 BSPRYQ5W0U4 402 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 KIAA0907Q7Z7F0 614 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 FMNL3Q8IVF7 1028 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 UNC45BQ8IWX7 931 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 AHI1Q8N157 1196 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 SIX6OS1Q8N1H7 587 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 IRGQQ8WZA9 623 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 AZIN2Q96A70 460 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 P2RY11Q96G91 374 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 GSDMAQ96QA5 445 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 ULBP1Q9BZM6 244 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 TMEM245Q9H330 911 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 SUN2Q9UH99 717 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 TSPAN16Q9UKR8 245 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 SCML1Q9UN30 329 aa17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 DSPP15924 2871 aaKnown RBP17.58■□□□□ 0.4
TRAPPC3-207ENST00000497251 APC2O95996 2303 aa17.57■□□□□ 0.4
TRAPPC3-207ENST00000497251 PMM2O15305 246 aa17.57■□□□□ 0.4
TRAPPC3-207ENST00000497251 FLRT2O43155 660 aa17.57■□□□□ 0.4
TRAPPC3-207ENST00000497251 DFNA5O60443 496 aa17.57■□□□□ 0.4
TRAPPC3-207ENST00000497251 PAEPP09466 180 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms