RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 FERMT1Q9BQL6 677 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 PLAC1Q9HBJ0 212 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 CNGB3Q9NQW8 809 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 TMPRSS4Q9NRS4 437 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 PIGVQ9NUD9 493 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 MIOSQ9NXC5 875 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 GGT7Q9UJ14 662 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 MYO16Q9Y6X6 1858 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 FRMPD3Q5JV73 1810 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 CASTOR2A6NHX0 329 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 C9IYK1 514 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 EEF2KO00418 725 aaKnown RBP13.47□□□□□ -0.25
GARNL3-220ENST00000496711 NRP1O14786 923 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 CAPN9O14815 690 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 CREB3O43889 395 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 HNRNPH1P31943 449 aaKnown RBP13.47□□□□□ -0.25
GARNL3-220ENST00000496711 RPL9P32969 192 aaKnown RBP13.47□□□□□ -0.25
GARNL3-220ENST00000496711 GLUD2P49448 558 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 NEK3P51956 506 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 SARNPP82979 210 aaKnown RBP13.47□□□□□ -0.25
GARNL3-220ENST00000496711 SLC18A2Q05940 514 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 CCDC15Q0P6D6 951 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 RAB41Q5JT25 222 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 RPAINQ86UA6 219 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 ECHDC2Q86YB7 292 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 GSDMBQ8TAX9 411 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 SLC7A14Q8TBB6 771 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 ZNF75CPQ92670 426 aaPredicted RBP13.47□□□□□ -0.25
GARNL3-220ENST00000496711 NTAN1Q96AB6 310 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 SMARCD1Q96GM5 515 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 SERAC1Q96JX3 654 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 SIGLEC10Q96LC7 697 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 LGMNQ99538 433 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 EBNA1BP2Q99848 306 aaKnown RBP13.47□□□□□ -0.25
GARNL3-220ENST00000496711 SLCO1B3Q9NPD5 702 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 SLC17A7Q9P2U7 560 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 TIMM13Q9Y5L4 95 aaPredicted RBP13.47□□□□□ -0.25
GARNL3-220ENST00000496711 SHROOM3Q8TF72 1996 aa13.47□□□□□ -0.25
GARNL3-220ENST00000496711 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 RNF103O00237 685 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 PPP1R12AO14974 1030 aaPredicted RBP13.46□□□□□ -0.25
GARNL3-220ENST00000496711 OPHN1O60890 802 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 KRT37O76014 449 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 FYNP06241 537 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 PCSK1P29120 753 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 RAB27AP51159 221 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 FCGRTP55899 365 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 CDK16Q00536 496 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 MGAT5Q09328 741 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 AP1B1Q10567 949 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 SCAPQ12770 1279 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 DPYSQ14117 519 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 PAFAH1B3Q15102 231 aaKnown RBP13.46□□□□□ -0.25
GARNL3-220ENST00000496711 PDK1Q15118 436 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 RFX8Q6ZV50 586 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 GPRIN1Q7Z2K8 1008 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 MRPL10Q7Z7H8 261 aaKnown RBP13.46□□□□□ -0.25
GARNL3-220ENST00000496711 FITM2Q8N6M3 262 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 ZMIZ2Q8NF64 920 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 APBB2Q92870 758 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 VPS11Q9H270 941 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 EIF2B3Q9NR50 452 aaKnown RBP13.46□□□□□ -0.25
GARNL3-220ENST00000496711 MAD1L1Q9Y6D9 718 aa13.46□□□□□ -0.25
GARNL3-220ENST00000496711 CFAP73A6NFT4 308 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 YJEFN3A6XGL0 299 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 TRIM49D1C9J1S8 452 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 E7ENQ6 273 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 DCLK1O15075 740 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 ZNF189O75820 626 aaPredicted RBP13.46□□□□□ -0.26
GARNL3-220ENST00000496711 FAM155BO75949 473 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 ODC1P11926 461 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 MLNP12872 115 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 NCALDP61601 193 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 NKX3-2P78367 333 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 BNIP1Q12981 228 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 UPP1Q16831 310 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 LGSNQ5TDP6 509 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 CYB5D1Q6P9G0 228 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 MPP5Q8N3R9 675 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 COLGALT1Q8NBJ5 622 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 RNF169Q8NCN4 708 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 P2RY11Q96G91 374 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 KCNK16Q96T55 309 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 AGO3Q9H9G7 860 aaKnown RBP13.46□□□□□ -0.26
GARNL3-220ENST00000496711 KLC4Q9NSK0 619 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 PCDHA11Q9Y5I1 949 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 NR2E3Q9Y5X4 410 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 USH1CQ9Y6N9 552 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 THSD7BQ9C0I4 1608 aa13.46□□□□□ -0.26
GARNL3-220ENST00000496711 FAM159BA6NKW6 160 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 CXorf49A8MYA2 514 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-220ENST00000496711 FAM155AB1AL88 458 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-220ENST00000496711 SEPT4O43236 478 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 ADAMTS4O75173 837 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 LTFP02788 710 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 SNRPAP09012 282 aaKnown RBP13.45□□□□□ -0.26
GARNL3-220ENST00000496711 USP17L7P0C7H9 530 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 DHRS4L1P0CG22 281 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 PYGBP11216 843 aa13.45□□□□□ -0.26
GARNL3-220ENST00000496711 ADRA1BP35368 520 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms