RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 SNX25Q9H3E2 840 aa11.8□□□□□ -0.52
LRP8-211ENST00000496580 PRORYQ9H606 182 aa11.8□□□□□ -0.52
LRP8-211ENST00000496580 EIF2B4Q9UI10 523 aaKnown RBP11.8□□□□□ -0.52
LRP8-211ENST00000496580 STON1Q9Y6Q2 735 aa11.8□□□□□ -0.52
LRP8-211ENST00000496580 ZNF462Q96JM2 2506 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 A0A1B0GTH6 734 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 TRIM49BA6NDI0 452 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 KCNK3O14649 394 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 TNNC2P02585 160 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 CISD3P0C7P0 127 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 GNL1P36915 607 aaPredicted RBP11.79□□□□□ -0.52
LRP8-211ENST00000496580 IL12RB1P42701 662 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 DGKGP49619 791 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 CSNK1EP49674 416 aaKnown RBP11.79□□□□□ -0.52
LRP8-211ENST00000496580 TPMTP51580 245 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 SLC5A3P53794 718 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 SMAD1Q15797 465 aaKnown RBP11.79□□□□□ -0.52
LRP8-211ENST00000496580 NFIL3Q16649 462 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 PTPRNQ16849 979 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 SNX30Q5VWJ9 437 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 CBWD2Q8IUF1 395 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 GPD1LQ8N335 351 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 PDCD7Q8N8D1 485 aaKnown RBP11.79□□□□□ -0.52
LRP8-211ENST00000496580 C1orf216Q8TAB5 229 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 XPO6Q96QU8 1125 aaKnown RBP11.79□□□□□ -0.52
LRP8-211ENST00000496580 DUSP9Q99956 384 aaKnown RBP11.79□□□□□ -0.52
LRP8-211ENST00000496580 PLK2Q9NYY3 685 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 R3HCC1Q9Y3T6 440 aaKnown RBP11.79□□□□□ -0.52
LRP8-211ENST00000496580 PCDHGB2Q9Y5G2 931 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 SNX11Q9Y5W9 270 aa11.79□□□□□ -0.52
LRP8-211ENST00000496580 METTL12A8MUP2 240 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 TK2O00142 265 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 GFRA2O00451 464 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 TACC1O75410 805 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 PRPF6O94906 941 aaKnown RBP11.78□□□□□ -0.52
LRP8-211ENST00000496580 RTN3O95197 1032 aaPredicted RBP11.78□□□□□ -0.52
LRP8-211ENST00000496580 TBX18O95935 607 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 CST3P01034 146 aaPredicted RBP11.78□□□□□ -0.52
LRP8-211ENST00000496580 ZDHHC11BP0C7U3 371 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 PMS1P54277 932 aaKnown RBP11.78□□□□□ -0.52
LRP8-211ENST00000496580 IL9RQ01113 521 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 ADAM9Q13443 819 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 NR1I3Q14994 352 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 KIF19Q2TAC6 998 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 ZCWPW2Q504Y3 356 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 IL27RAQ6UWB1 636 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 METTL3Q86U44 580 aaKnown RBP11.78□□□□□ -0.52
LRP8-211ENST00000496580 FAM35AQ86V20 835 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 CREBRFQ8IUR6 639 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 NELFCDQ8IXH7 590 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 SYCP3Q8IZU3 236 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 B3GALNT2Q8NCR0 500 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 CADM4Q8NFZ8 388 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 SNX19Q92543 992 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 IQCDQ96DY2 449 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
LRP8-211ENST00000496580 NACA2Q9H009 215 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 KCTD10Q9H3F6 313 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 METTL14Q9HCE5 456 aaKnown RBP11.78□□□□□ -0.52
LRP8-211ENST00000496580 ITM2CQ9NQX7 267 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 MARK1Q9P0L2 795 aa11.78□□□□□ -0.52
LRP8-211ENST00000496580 TP53BP1Q12888 1972 aaPredicted RBP11.78□□□□□ -0.52
LRP8-211ENST00000496580 A8MXQ7 604 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 MDM4O15151 490 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 TNFSF14O43557 240 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 TLR5O60602 858 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 TPM1P09493 284 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 HLA-EP13747 358 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 EIF2S3P41091 472 aaKnown RBP11.77□□□□□ -0.53
LRP8-211ENST00000496580 MTIF2P46199 727 aaKnown RBP11.77□□□□□ -0.53
LRP8-211ENST00000496580 TUBP50607 506 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 COPB1P53618 953 aaKnown RBP11.77□□□□□ -0.53
LRP8-211ENST00000496580 COPAP53621 1224 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 STARD3Q14849 445 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 KRT31Q15323 416 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 GEN1Q17RS7 908 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 CCDC40Q4G0X9 1142 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 KCNT1Q5JUK3 1230 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 FKBP15Q5T1M5 1219 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 PCSK4Q6UW60 755 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 PAQR9Q6ZVX9 377 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 HTR3DQ70Z44 454 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 TRAPPC11Q7Z392 1133 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 ZNF605Q86T29 641 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 FAM124AQ86V42 546 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 TMPRSS6Q8IU80 811 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 TMEM174Q8WUU8 243 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 SIPA1Q96FS4 1042 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 FCRL3Q96P31 734 aaPredicted RBP11.77□□□□□ -0.53
LRP8-211ENST00000496580 C6orf106Q9H6K1 298 aaPredicted RBP11.77□□□□□ -0.53
LRP8-211ENST00000496580 RTN4Q9NQC3 1192 aaKnown RBP11.77□□□□□ -0.53
LRP8-211ENST00000496580 IL37Q9NZH6 218 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.77□□□□□ -0.538e-8■■■□□ 15.7
LRP8-211ENST00000496580 CKAP5Q14008 2032 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 NUMA1Q14980 2115 aa11.77□□□□□ -0.53
LRP8-211ENST00000496580 FAM92AA1XBS5 289 aa11.76□□□□□ -0.53
LRP8-211ENST00000496580 H0Y8X5 98 aa11.76□□□□□ -0.53
LRP8-211ENST00000496580 CBX4O00257 560 aa11.76□□□□□ -0.53
LRP8-211ENST00000496580 SLC16A3O15427 465 aaKnown RBP11.76□□□□□ -0.53
LRP8-211ENST00000496580 BEST1O76090 585 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms