RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.37■□□□□ 0.21
HDAC4-213ENST00000496347 BCLAF3A2AJT9 711 aaKnown RBP16.37■□□□□ 0.21
HDAC4-213ENST00000496347 E5RJQ4 531 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 SLC30A4O14863 429 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 GABRG2P18507 467 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 EEF1GP26641 437 aaKnown RBP16.37■□□□□ 0.21
HDAC4-213ENST00000496347 USP8P40818 1118 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 DPP6P42658 865 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 CREB5Q02930 508 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 ENPP2Q13822 863 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 ARHGAP44Q17R89 818 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 GEN1Q17RS7 908 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 MAP7D1Q3KQU3 841 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 MIIPQ5JXC2 388 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 RNF43Q68DV7 783 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 RBM43Q6ZSC3 357 aaKnown RBP16.37■□□□□ 0.21
HDAC4-213ENST00000496347 LPCAT2Q7L5N7 544 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 CYP2U1Q7Z449 544 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 TMEM110Q86TL2 294 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 DQX1Q8TE96 717 aaKnown RBP16.37■□□□□ 0.21
HDAC4-213ENST00000496347 WFIKKN2Q8TEU8 576 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 IPO4Q8TEX9 1081 aaKnown RBP16.37■□□□□ 0.21
HDAC4-213ENST00000496347 AZIN2Q96A70 460 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 ACOX2Q99424 681 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 SIX2Q9NPC8 291 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 CACNA2D2Q9NY47 1150 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 PCDHGC3Q9UN70 934 aa16.37■□□□□ 0.21
HDAC4-213ENST00000496347 CACNA1EQ15878 2313 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 KCNJ18B7U540 433 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 GOLGA6L22H0YM25 854 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 PAPSS1O43252 624 aaPredicted RBP16.36■□□□□ 0.21
HDAC4-213ENST00000496347 ZNF217O75362 1048 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 FYNP06241 537 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 NDUFV2P19404 249 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 ATXN1P54253 815 aaKnown RBP16.36■□□□□ 0.21
HDAC4-213ENST00000496347 TBX4P57082 545 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 APBA1Q02410 837 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 PTK2Q05397 1052 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 KCNJ12Q14500 433 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 SCUBE3Q8IX30 993 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 PGBD3Q8N328 593 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.36■□□□□ 0.21
HDAC4-213ENST00000496347 FCRL2Q96LA5 508 aaPredicted RBP16.36■□□□□ 0.21
HDAC4-213ENST00000496347 NOX5Q96PH1 765 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 DDX50Q9BQ39 737 aaKnown RBP16.36■□□□□ 0.21
HDAC4-213ENST00000496347 POPDC2Q9HBU9 364 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 ACP6Q9NPH0 428 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 THAP10Q9P2Z0 257 aaPredicted RBP16.36■□□□□ 0.21
HDAC4-213ENST00000496347 INVSQ9Y283 1065 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 CEP83Q9Y592 693 aa16.36■□□□□ 0.21
HDAC4-213ENST00000496347 TYW5A2RUC4 315 aaKnown RBP16.35■□□□□ 0.21
HDAC4-213ENST00000496347 TIMM44O43615 452 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 CAVIN2O95810 425 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 HOXD12P35452 270 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 WASP42768 502 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 SF3A2Q15428 464 aaKnown RBP16.35■□□□□ 0.21
HDAC4-213ENST00000496347 CCDC6Q16204 474 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 FAM133BQ5BKY9 247 aaKnown RBP16.35■□□□□ 0.21
HDAC4-213ENST00000496347 KIAA1211LQ6NV74 962 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 SLC36A4Q6YBV0 504 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 TAC4Q86UU9 113 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 AHI1Q8N157 1196 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 HJURPQ8NCD3 748 aaPredicted RBP16.35■□□□□ 0.21
HDAC4-213ENST00000496347 RLN3Q8WXF3 142 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 DDX1Q92499 740 aaKnown RBP16.35■□□□□ 0.21
HDAC4-213ENST00000496347 LHX5Q9H2C1 402 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 ASNSD1Q9NWL6 643 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 ELOVL2Q9NXB9 296 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 CYTH4Q9UIA0 394 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 DNAJC12Q9UKB3 198 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 NFE2L3Q9Y4A8 694 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 STON1Q9Y6Q2 735 aa16.35■□□□□ 0.21
HDAC4-213ENST00000496347 CAPN9O14815 690 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 MAP3K13O43283 966 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 AP5Z1O43299 807 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 ACSL4O60488 711 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 HSF2BPO75031 334 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 IGLV3-25P01717 112 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 APOEP02649 317 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 GLI1P08151 1106 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 HLA-FP30511 346 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 SNX16P57768 344 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 BPIFB4P59827 614 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 YWHAZP63104 245 aaKnown RBP16.34■□□□□ 0.21
HDAC4-213ENST00000496347 TCP11X2Q5H9J9 407 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 PIK3R6Q5UE93 754 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 FAM71AQ8IYT1 594 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 ENOX1Q8TC92 643 aaKnown RBP16.34■□□□□ 0.21
HDAC4-213ENST00000496347 TMA16Q96EY4 203 aaKnown RBP16.34■□□□□ 0.21
HDAC4-213ENST00000496347 SLC39A13Q96H72 371 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 MRGPRX1Q96LB2 322 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 PRICKLE1Q96MT3 831 aaPredicted RBP16.34■□□□□ 0.21
HDAC4-213ENST00000496347 CPXM1Q96SM3 734 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 CIPCQ9C0C6 399 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 MBD1Q9UIS9 605 aaPredicted RBP16.34■□□□□ 0.21
HDAC4-213ENST00000496347 AJAP1Q9UKB5 411 aaPredicted RBP16.34■□□□□ 0.21
HDAC4-213ENST00000496347 CLEC4EQ9ULY5 219 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 NAALADL1Q9UQQ1 740 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 RAD54BQ9Y620 910 aa16.34■□□□□ 0.21
HDAC4-213ENST00000496347 TPRP12270 2363 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms