RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 TRIM72Q6ZMU5 477 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 TPGS1Q6ZTW0 290 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 SYT13Q7L8C5 426 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 SLC26A9Q7LBE3 791 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 CACNA2D4Q7Z3S7 1137 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 C12orf40Q86WS4 652 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 ERICH1Q86X53 443 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 NAT16Q8N8M0 369 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 MSANTD4Q8NCY6 345 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 ZNF397Q8NF99 534 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-233ENST00000495899 DQX1Q8TE96 717 aaKnown RBP12.88□□□□□ -0.35
MRPL55-233ENST00000495899 USP33Q8TEY7 942 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 ATRIPQ8WXE1 791 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 ACDQ96AP0 544 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 C18orf8Q96DM3 657 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 SLC2A13Q96QE2 648 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 SLC2A11Q9BYW1 496 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 FBXO10Q9UK96 956 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 MYH10P35580 1976 aa12.88□□□□□ -0.35
MRPL55-233ENST00000495899 CCDC163A0A0D9SF12 145 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 TBC1D3BA6NDS4 549 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 GOLGA6L19H0YKK7 550 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 K7ESF4 209 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 IRAK2O43187 625 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 MSI1O43347 362 aaKnown RBP12.87□□□□□ -0.35
MRPL55-233ENST00000495899 ERBB2P04626 1255 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 CYP1A1P04798 512 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-233ENST00000495899 MMEP08473 750 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 GBP1P32455 592 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 CDK17Q00537 523 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 MTA1Q13330 715 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 EIF4EBP2Q13542 120 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-233ENST00000495899 NR1I3Q14994 352 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 DCAF6Q58WW2 860 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 MPP7Q5T2T1 576 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 FYB2Q5VWT5 728 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 GRAMD4Q6IC98 578 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 OR6B2Q6IFH4 312 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 FAM183BPQ6ZVS7 135 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 LUZP1Q86V48 1076 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 CAMKK1Q8N5S9 505 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 RPLP0P6Q8NHW5 317 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 SLC39A13Q96H72 371 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 NAP1L5Q96NT1 182 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-233ENST00000495899 DDX50Q9BQ39 737 aaKnown RBP12.87□□□□□ -0.35
MRPL55-233ENST00000495899 EDEM3Q9BZQ6 932 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 FAM86C1Q9NVL1 165 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 DNAJC17Q9NVM6 304 aaKnown RBP12.87□□□□□ -0.35
MRPL55-233ENST00000495899 RRN3Q9NYV6 651 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 SLC8A2Q9UPR5 921 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 SLC27A6Q9Y2P4 619 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 STARD13Q9Y3M8 1113 aa12.87□□□□□ -0.35
MRPL55-233ENST00000495899 RCCD1A6NED2 376 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 GFRA2O00451 464 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 LILRB5O75023 590 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 TRUB2O95900 331 aaKnown RBP12.86□□□□□ -0.35
MRPL55-233ENST00000495899 IGLV3-25P01717 112 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 CISD3P0C7P0 127 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 SLC2A3P11169 496 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 FERP16591 822 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 CHRNB2P17787 502 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 CNR2P34972 360 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 NOS2P35228 1153 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 KIR2DL1P43626 348 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-233ENST00000495899 DGKGP49619 791 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 NOMO3P69849 1222 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 MESP2Q0VG99 397 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 TAF5Q15542 800 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 PKN3Q6P5Z2 889 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 TSSK4Q6SA08 328 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 ARCQ7LC44 396 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 TRMT11Q7Z4G4 463 aaKnown RBP12.86□□□□□ -0.35
MRPL55-233ENST00000495899 DEFB106AQ8N104 65 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 TERB1Q8NA31 727 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 NKD2Q969F2 451 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-233ENST00000495899 TMA16Q96EY4 203 aaKnown RBP12.86□□□□□ -0.35
MRPL55-233ENST00000495899 PIWIL1Q96J94 861 aaKnown RBP12.86□□□□□ -0.35
MRPL55-233ENST00000495899 FCRL2Q96LA5 508 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-233ENST00000495899 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.86□□□□□ -0.35
MRPL55-233ENST00000495899 MYO16Q9Y6X6 1858 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 CACNA1HO95180 2353 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
MRPL55-233ENST00000495899 TK2O00142 265 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 SMAPO00193 183 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 ACSL4O60488 711 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 APOEP02649 317 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 MMP8P22894 467 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 MATKP42679 507 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 SEC13P55735 322 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
MRPL55-233ENST00000495899 FANCCQ00597 558 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 FMO1Q01740 532 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 KDSRQ06136 332 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 E2F5Q15329 346 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 C2orf27AQ580R0 203 aa12.85□□□□□ -0.35
MRPL55-233ENST00000495899 FIGNQ5HY92 759 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms