RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 VCPIP1Q96JH7 1222 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 MCEEQ96PE7 176 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 PIGVQ9NUD9 493 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 RRN3Q9NYV6 651 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 MYO1AQ9UBC5 1043 aa20.2■□□□□ 0.82
HDAC4-212ENST00000495497 C2CD4BA6NLJ0 364 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 NEDD8-MDP1E9PL57 170 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 ACSL4O60488 711 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 DCNP07585 359 aaKnown RBP20.19■□□□□ 0.82
HDAC4-212ENST00000495497 ABCB4P21439 1286 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 SLC6A4P31645 630 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 CHKAP35790 457 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 OPRD1P41143 372 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 DEUP1Q05D60 604 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 MAPK8IP2Q13387 824 aaPredicted RBP20.19■□□□□ 0.82
HDAC4-212ENST00000495497 CDO1Q16878 200 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 PPP1R15BQ5SWA1 713 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 ALKBH5Q6P6C2 394 aaKnown RBP20.19■□□□□ 0.82
HDAC4-212ENST00000495497 RFWD3Q6PCD5 774 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 ARCQ7LC44 396 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 FAM217AQ8IXS0 508 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 ZNF687Q8N1G0 1237 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 SPC24Q8NBT2 197 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 BBS2Q9BXC9 721 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 NHEJ1Q9H9Q4 299 aaPredicted RBP20.19■□□□□ 0.82
HDAC4-212ENST00000495497 CNOT8Q9UFF9 292 aaKnown RBP20.19■□□□□ 0.82
HDAC4-212ENST00000495497 STOML2Q9UJZ1 356 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 NENFQ9UMX5 172 aa20.19■□□□□ 0.82
HDAC4-212ENST00000495497 APOEP02649 317 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 TYRP14679 529 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 AOC1P19801 751 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 SDC4P31431 198 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 SLC11A2P49281 568 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 SGSHP51688 502 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 MESP2Q0VG99 397 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 MAMLD1Q13495 774 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 FAM133BQ5BKY9 247 aaKnown RBP20.18■□□□□ 0.82
HDAC4-212ENST00000495497 ADGRF1Q5T601 910 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 ASTLQ6HA08 431 aaPredicted RBP20.18■□□□□ 0.82
HDAC4-212ENST00000495497 PLEKHA7Q6IQ23 1121 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 CCDC105Q8IYK2 499 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 TMEM105Q8N8V8 129 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 PJA1Q8NG27 643 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 CD101Q93033 1021 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 MYEOVQ96EZ4 313 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 MSANTD3Q96H12 275 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 P2RY13Q9BPV8 354 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 DEF6Q9H4E7 631 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 ANLNQ9NQW6 1124 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 RBM12Q9NTZ6 932 aaKnown RBP20.18■□□□□ 0.82
HDAC4-212ENST00000495497 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.18■□□□□ 0.822e-7■■■■□ 24.4
HDAC4-212ENST00000495497 SIT1Q9Y3P8 196 aa20.18■□□□□ 0.82
HDAC4-212ENST00000495497 SSU72P8A0A1W2PR75 194 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 KCNU1A8MYU2 1149 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 TRIM24O15164 1050 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 HOXC11O43248 304 aaPredicted RBP20.17■□□□□ 0.82
HDAC4-212ENST00000495497 LATS1O95835 1130 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 GPD1P21695 349 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 CDC25BP30305 580 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 CCR1P32246 355 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 CXCR3P49682 368 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 AMPD2Q01433 879 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 OGDHQ02218 1023 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 KDSRQ06136 332 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 FZD5Q13467 585 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 SLC18A3Q16572 532 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 FYB2Q5VWT5 728 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 FSTL4Q6MZW2 842 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 DCUN1D2Q6PH85 259 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 BNIPLQ7Z465 357 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 SUGP1Q8IWZ8 645 aaKnown RBP20.17■□□□□ 0.82
HDAC4-212ENST00000495497 CPXM2Q8N436 756 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 ATP6V0D2Q8N8Y2 350 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 AZIN2Q96A70 460 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 PGAP3Q96FM1 320 aaPredicted RBP20.17■□□□□ 0.82
HDAC4-212ENST00000495497 THAP2Q9H0W7 228 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 TMPRSS4Q9NRS4 437 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 SPTLC3Q9NUV7 552 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 PARVAQ9NVD7 372 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 MARK1Q9P0L2 795 aa20.17■□□□□ 0.82
HDAC4-212ENST00000495497 MRPS17Q9Y2R5 130 aaKnown RBP20.17■□□□□ 0.82
HDAC4-212ENST00000495497 GFRA2O00451 464 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 AKR1B10O60218 316 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 EGFP01133 1207 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 CLCN5P51795 746 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 PPP2R5DQ14738 602 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 TMEM196Q5HYL7 178 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 RAP1GAP2Q684P5 730 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 FAM131BQ86XD5 332 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 SFTPA1Q8IWL2 248 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 DDI1Q8WTU0 396 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 EZH1Q92800 747 aaPredicted RBP20.16■□□□□ 0.82
HDAC4-212ENST00000495497 ARHGEF26Q96DR7 871 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 CCDC42Q96M95 316 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 PACSIN1Q9BY11 444 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 TRIM7Q9C029 511 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 TKTL2Q9H0I9 626 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 WDCPQ9H6R7 721 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 LMAN1LQ9HAT1 526 aa20.16■□□□□ 0.82
HDAC4-212ENST00000495497 CLEC4EQ9ULY5 219 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms