RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 DCAF6Q58WW2 860 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 ANO7Q6IWH7 933 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 CCDC117Q8IWD4 279 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-211ENST00000494800 GANQ9H2C0 597 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 FAM204AQ9H8W3 233 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 SLC12A6Q9UHW9 1150 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 DMDP11532 3685 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 KIAA1549LQ6ZVL6 1849 aa18.35■□□□□ 0.53
HDAC4-211ENST00000494800 TSPAN3O60637 253 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 TRUB2O95900 331 aaKnown RBP18.34■□□□□ 0.53
HDAC4-211ENST00000494800 SLC2A3P11169 496 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 HOXB2P14652 356 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 STAT1P42224 750 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 ARID5AQ03989 594 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 MTA1Q13330 715 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 NCAPHQ15003 741 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 EIF4HQ15056 248 aaKnown RBP18.34■□□□□ 0.53
HDAC4-211ENST00000494800 FILIP1LQ4L180 1135 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 MPP7Q5T2T1 576 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 TAF3Q5VWG9 929 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 SYPL2Q5VXT5 272 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 FAM183BPQ6ZVS7 135 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 TAC4Q86UU9 113 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 PGBD3Q8N328 593 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 ADAM32Q8TC27 787 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 NLRC4Q9NPP4 1024 aa18.34■□□□□ 0.53
HDAC4-211ENST00000494800 PRRT4C9JH25 899 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 GFRA2O00451 464 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 TIMM44O43615 452 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 ADAM23O75077 832 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 GFPT2O94808 682 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 ERBB2P04626 1255 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 RETP07949 1114 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 CDH5P33151 784 aaPredicted RBP18.33■□□□□ 0.52
HDAC4-211ENST00000494800 SOX5P35711 763 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 KLK7P49862 253 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 ZNF165P49910 485 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 TPM4P67936 248 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 SLC6A3Q01959 620 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 BYSLQ13895 437 aaKnown RBP18.33■□□□□ 0.52
HDAC4-211ENST00000494800 ELF2Q15723 593 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 PTPN20Q4JDL3 420 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 EGFLAMQ63HQ2 1017 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 TMEM92Q6UXU6 159 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 NOP9Q86U38 636 aaKnown RBP18.33■□□□□ 0.52
HDAC4-211ENST00000494800 RASSF3Q86WH2 238 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 ERICH1Q86X53 443 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 HJURPQ8NCD3 748 aaPredicted RBP18.33■□□□□ 0.52
HDAC4-211ENST00000494800 RNF34Q969K3 372 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 SPACA7Q96KW9 195 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 FCRL2Q96LA5 508 aaPredicted RBP18.33■□□□□ 0.52
HDAC4-211ENST00000494800 SLC2A13Q96QE2 648 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 ERGIC2Q96RQ1 377 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 ZDHHC4Q9NPG8 344 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 TMEM51Q9NW97 253 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.33■□□□□ 0.52
HDAC4-211ENST00000494800 SIK3Q9Y2K2 1263 aa18.33■□□□□ 0.52
HDAC4-211ENST00000494800 TCRBV21S2A2A0A5A6 115 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 MOCS2O96007 188 aaPredicted RBP18.32■□□□□ 0.52
HDAC4-211ENST00000494800 HNRNPLP14866 589 aaKnown RBP eCLIP18.32■□□□□ 0.525e-8■■■■■ 27.1
HDAC4-211ENST00000494800 ABCB4P21439 1286 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 HOXD9P28356 352 aaPredicted RBP18.32■□□□□ 0.52
HDAC4-211ENST00000494800 HOXC13P31276 330 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 STARD3Q14849 445 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 TAF5Q15542 800 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 OLFML1Q6UWY5 402 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 SLC26A9Q7LBE3 791 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 DEFB106AQ8N104 65 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 ATP6V0D2Q8N8Y2 350 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 MDGA1Q8NFP4 955 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 EPS8L1Q8TE68 723 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 WFIKKN2Q8TEU8 576 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 HMGB4Q8WW32 186 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 C18orf8Q96DM3 657 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 SLC39A13Q96H72 371 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 PIWIL1Q96J94 861 aaKnown RBP18.32■□□□□ 0.52
HDAC4-211ENST00000494800 LOXL4Q96JB6 756 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 BTN2A3PQ96KV6 586 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 TPSD1Q9BZJ3 242 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 CIPCQ9C0C6 399 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 DDIT4Q9NX09 232 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 RRN3Q9NYV6 651 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 TJP2Q9UDY2 1190 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 STAP1Q9ULZ2 295 aa18.32■□□□□ 0.52
HDAC4-211ENST00000494800 ANTXRLA6NF34 631 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 TBL1XO60907 577 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 LRP3O75074 770 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 DAB1O75553 588 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 GRAP2O75791 330 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 RHOBTB1O94844 696 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 CCDC172P0C7W6 258 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 CHRM1P11229 460 aaPredicted RBP18.31■□□□□ 0.52
HDAC4-211ENST00000494800 CCR1P32246 355 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 NOS2P35228 1153 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 JAM2P57087 298 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 CDR2Q01850 454 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 GEN1Q17RS7 908 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 FAM133BQ5BKY9 247 aaKnown RBP18.31■□□□□ 0.52
HDAC4-211ENST00000494800 PIK3R6Q5UE93 754 aa18.31■□□□□ 0.52
HDAC4-211ENST00000494800 RFWD3Q6PCD5 774 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms