RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CHST12Q9NRB3 414 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 KCND1Q9NSA2 647 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 TBC1D13Q9NVG8 400 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 DACT1Q9NYF0 836 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 DNAJB4Q9UDY4 337 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 PNMA8BQ9ULN7 279 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 VPS13AQ96RL7 3174 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 MYO15AQ9UKN7 3530 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 NARSO43776 548 aaKnown RBP5.73□□□□□ -1.49
PTCD3-219ENST00000494323 B4GALT3O60512 393 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 DDHD2O94830 711 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 STBD1O95210 358 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 POMCP01189 267 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 PLA2G1BP04054 148 aaKnown RBP5.73□□□□□ -1.49
PTCD3-219ENST00000494323 ALDH2P05091 517 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 CNPP09543 421 aaKnown RBP5.73□□□□□ -1.49
PTCD3-219ENST00000494323 SPATA31D3P0C874 917 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 CTSAP10619 480 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 GNA11P29992 359 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 CIITAP33076 1130 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 SLC11A1P49279 550 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 MTNR1BP49286 362 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 CLCN5P51795 746 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 AFF3P51826 1226 aaKnown RBP5.73□□□□□ -1.49
PTCD3-219ENST00000494323 MANFP55145 182 aaKnown RBP5.73□□□□□ -1.49
PTCD3-219ENST00000494323 SETQ01105 290 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-219ENST00000494323 ADCY2Q08462 1091 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 TDGQ13569 410 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 MYBPC3Q14896 1274 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 NOMO2Q5JPE7 1267 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 LRCH2Q5VUJ6 765 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 KIAA1841Q6NSI8 718 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 LRSAM1Q6UWE0 723 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 GLB1LQ6UWU2 654 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 SPATA31D4Q6ZUB0 917 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 EPM2AIP1Q7L775 607 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-219ENST00000494323 KANSL1Q7Z3B3 1105 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 MIER3Q7Z3K6 550 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 GPR149Q86SP6 731 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 ZDHHC14Q8IZN3 488 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 STPG3Q8N7X2 389 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 KCNG4Q8TDN1 519 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 TEKT5Q96M29 485 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 ZSWIM3Q96MP5 696 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 PWWP2AQ96N64 755 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 KLHL5Q96PQ7 755 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 MRPL9Q9BYD2 267 aaKnown RBP5.73□□□□□ -1.49
PTCD3-219ENST00000494323 ZBP1Q9H171 429 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 UNC45AQ9H3U1 944 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 ANLNQ9NQW6 1124 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 VPS54Q9P1Q0 977 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 SUCLA2Q9P2R7 463 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-219ENST00000494323 CROTQ9UKG9 612 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 PIN4Q9Y237 131 aaKnown RBP5.73□□□□□ -1.49
PTCD3-219ENST00000494323 ANKRD6Q9Y2G4 727 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 GIT1Q9Y2X7 761 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 SPTBN2O15020 2390 aa5.73□□□□□ -1.49
PTCD3-219ENST00000494323 IGKV6-21A0A0C4DH24 114 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 CCDC196A0A1B0GTZ2 297 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 CCDC195A0A1B0GUA6 201 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 ESYT2A0FGR8 921 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 N4BP1O75113 896 aaKnown RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 PSMD10O75832 226 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 APOL3O95236 402 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 IL18BPO95998 194 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 AOC1P19801 751 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 LPOP22079 712 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 ENPP1P22413 925 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 SFPQP23246 707 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 SFNP31947 248 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 CLCN4P51793 760 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 JAK3P52333 1124 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 POLGP54098 1239 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 AK2P54819 239 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 NPEPPSP55786 919 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 NLRP5P59047 1200 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 CCT2P78371 535 aaKnown RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 IL13RA1P78552 427 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 CDC42EP1Q00587 391 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 SRSF2Q01130 221 aaKnown RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 AKAP17AQ02040 695 aaKnown RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 NFATC3Q12968 1075 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 GIT2Q14161 759 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 RTP5Q14D33 572 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 ANGPT1Q15389 498 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 PTPN14Q15678 1187 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 LETM2Q2VYF4 491 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 XKR3Q5GH77 459 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 KANK2Q63ZY3 851 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 PLA2G4FQ68DD2 849 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 MCTP2Q6DN12 878 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 CATSPER4Q7RTX7 472 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 KCNK18Q7Z418 384 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 PALB2Q86YC2 1186 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 TBCKQ8TEA7 893 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 CCDC12Q8WUD4 166 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 PRPF31Q8WWY3 499 aaKnown RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 RIN2Q8WYP3 895 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-219ENST00000494323 JADE3Q92613 823 aa5.72□□□□□ -1.49
PTCD3-219ENST00000494323 TMEM143Q96AN5 459 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms