RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 MYEOVQ96EZ4 313 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 SERPINB11Q96P15 392 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 NOX5Q96PH1 765 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 LHX5Q9H2C1 402 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 SYNCQ9H7C4 482 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 POPDC2Q9HBU9 364 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 XPO7Q9UIA9 1087 aaKnown RBP15.3■□□□□ 0.04
ATG4B-224ENST00000494132 RAB23Q9ULC3 237 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 PLXND1Q9Y4D7 1925 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 RAD54BQ9Y620 910 aa15.3■□□□□ 0.04
ATG4B-224ENST00000494132 GON4LQ3T8J9 2241 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 MUC22E2RYF6 1773 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-224ENST00000494132 TCRBV21S2A2A0A5A6 115 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 TRUB2O95900 331 aaKnown RBP15.29■□□□□ 0.04
ATG4B-224ENST00000494132 HOXD9P28356 352 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-224ENST00000494132 HOXA6P31267 233 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 FAM133BQ5BKY9 247 aaKnown RBP15.29■□□□□ 0.04
ATG4B-224ENST00000494132 ZC3H12AQ5D1E8 599 aaKnown RBP15.29■□□□□ 0.04
ATG4B-224ENST00000494132 EOGTQ5NDL2 527 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 ADGRF1Q5T601 910 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 NUGGCQ68CJ6 796 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-224ENST00000494132 EPS8L1Q8TE68 723 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 IPO4Q8TEX9 1081 aaKnown RBP15.29■□□□□ 0.04
ATG4B-224ENST00000494132 HMGB4Q8WW32 186 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 GAB3Q8WWW8 586 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 DDX1Q92499 740 aaKnown RBP15.29■□□□□ 0.04
ATG4B-224ENST00000494132 SPAG5Q96R06 1193 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 FUCA2Q9BTY2 467 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 NAT10Q9H0A0 1025 aaKnown RBP15.29■□□□□ 0.04
ATG4B-224ENST00000494132 FAM204AQ9H8W3 233 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 CACNA2D2Q9NY47 1150 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 STIM2Q9P246 746 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 FBXO10Q9UK96 956 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 CEP83Q9Y592 693 aa15.29■□□□□ 0.04
ATG4B-224ENST00000494132 WASH3PC4AMC7 463 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 IRAK2O43187 625 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 TEX33O43247 280 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 ACSL4O60488 711 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 HOXB2P14652 356 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 SOX5P35711 763 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 JAM2P57087 298 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 RNASE9P60153 205 aaKnown RBP15.28■□□□□ 0.04
ATG4B-224ENST00000494132 RING1Q06587 406 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 KLHL40Q2TBA0 621 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 PREPLQ4J6C6 727 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-224ENST00000494132 MPPE1Q53F39 396 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 OLFML1Q6UWY5 402 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 NUDT18Q6ZVK8 323 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 KBTBD6Q86V97 674 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 UNC45BQ8IWX7 931 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 CHPFQ8IZ52 775 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 FAM160A2Q8N612 972 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-224ENST00000494132 TMEM35BQ8NCS4 154 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 NEK11Q8NG66 645 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 WFDC5Q8TCV5 224 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 SORCS1Q8WY21 1168 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 TMA16Q96EY4 203 aaKnown RBP15.28■□□□□ 0.04
ATG4B-224ENST00000494132 SLC39A13Q96H72 371 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 NUCKS1Q9H1E3 243 aaKnown RBP15.28■□□□□ 0.04
ATG4B-224ENST00000494132 BCCIPQ9P287 314 aaKnown RBP eCLIP15.28■□□□□ 0.04
ATG4B-224ENST00000494132 STOML2Q9UJZ1 356 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 GMEB2Q9UKD1 530 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 TLR6Q9Y2C9 796 aa15.28■□□□□ 0.04
ATG4B-224ENST00000494132 NYNRINQ9P2P1 1898 aaKnown RBP15.28■□□□□ 0.04
ATG4B-224ENST00000494132 TNRC6BQ9UPQ9 1833 aaKnown RBP15.28■□□□□ 0.04
ATG4B-224ENST00000494132 CCDC163A0A0D9SF12 145 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 GFRA2O00451 464 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 TBL1XO60907 577 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 HSF2BPO75031 334 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 NTSR1P30989 418 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 CNR2P34972 360 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 SLC11A2P49281 568 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 NUMBP49757 651 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 ZNF165P49910 485 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 SLC6A3Q01959 620 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 ARID5AQ03989 594 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 SPEM2Q0P670 501 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 EFHC1Q5JVL4 640 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 NAA35Q5VZE5 725 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 RAP1GAP2Q684P5 730 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 KIAA1211LQ6NV74 962 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 ANKS1BQ7Z6G8 1248 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 PHLDB2Q86SQ0 1253 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 CFAP52Q8N1V2 620 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 PGBD3Q8N328 593 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 FRMD1Q8N878 549 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 RLN3Q8WXF3 142 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 CPA5Q8WXQ8 436 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 PRICKLE1Q96MT3 831 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-224ENST00000494132 SLC2A13Q96QE2 648 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 BPIFA3Q9BQP9 254 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 CIPCQ9C0C6 399 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 SLC6A17Q9H1V8 727 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 POLMQ9NP87 494 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-224ENST00000494132 NOCTQ9UK39 431 aaKnown RBP15.27■□□□□ 0.04
ATG4B-224ENST00000494132 STARD13Q9Y3M8 1113 aa15.27■□□□□ 0.04
ATG4B-224ENST00000494132 PI4KAP42356 2102 aa15.26■□□□□ 0.03
ATG4B-224ENST00000494132 CFAP54Q96N23 3096 aa15.26■□□□□ 0.03
ATG4B-224ENST00000494132 SMTNL1A8MU46 457 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms