RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 RNF14Q9UBS8 474 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 TTC7AQ9ULT0 858 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-231ENST00000494043 ANAPC1Q9H1A4 1944 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 hCG_1818297A0A087WSY0 165 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 SOBPA7XYQ1 873 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 ZNF487B1APH4 448 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 MOCS2O96007 188 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-231ENST00000494043 CKMP06732 381 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 HMBSP08397 361 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 CD48P09326 243 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 MBL2P11226 248 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-231ENST00000494043 HOXB8P17481 243 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-231ENST00000494043 CEBPBP17676 345 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 HDCP19113 662 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 L1CAMP32004 1257 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 CETN2P41208 172 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 CDKN2BP42772 138 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 SLC7A9P82251 487 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 COG7P83436 770 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 CKAP4Q07065 602 aaKnown RBP11.82□□□□□ -0.52
MCF2L-231ENST00000494043 DPYSL3Q14195 570 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 COL19A1Q14993 1142 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 TEAD2Q15562 447 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 TFDP3Q5H9I0 405 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 PPP6R3Q5H9R7 873 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-231ENST00000494043 GPR158Q5T848 1215 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 CCDC181Q5TID7 509 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 NUGGCQ68CJ6 796 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 SYCE2Q6PIF2 218 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 ANKS1BQ7Z6G8 1248 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 GPR149Q86SP6 731 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 SLC13A5Q86YT5 568 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-231ENST00000494043 MAP7D3Q8IWC1 876 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 PYROXD2Q8N2H3 581 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 MAB21L3Q8N8X9 362 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 TSC1Q92574 1164 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 PLD4Q96BZ4 506 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 ZFRQ96KR1 1074 aaKnown RBP11.82□□□□□ -0.52
MCF2L-231ENST00000494043 HAPLN3Q96S86 360 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 CYP2S1Q96SQ9 504 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 GAS2L1Q99501 681 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-231ENST00000494043 ZNF670Q9BS34 389 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 CALN1Q9BXU9 219 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 MAGEB5Q9BZ81 275 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 OSBPL8Q9BZF1 889 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 SMARCAL1Q9NZC9 954 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 MRPS23Q9Y3D9 190 aaKnown RBP11.82□□□□□ -0.52
MCF2L-231ENST00000494043 CLUHO75153 1309 aa11.82□□□□□ -0.52
MCF2L-231ENST00000494043 MYO9BQ13459 2157 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 PDE2AO00408 941 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-231ENST00000494043 TBX10O75333 385 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 PAGE1O75459 146 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 STC2O76061 302 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 FGGP02679 453 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 IGFBP4P22692 258 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 PAFAH1B1P43034 410 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 KCNQ1P51787 676 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 ZNF135P52742 658 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-231ENST00000494043 MMRN1Q13201 1228 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 SEMA3BQ13214 749 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 MTA1Q13330 715 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 CLUL1Q15846 466 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 LONRF2Q1L5Z9 754 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 CTC1Q2NKJ3 1217 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 ZNF572Q7Z3I7 529 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-231ENST00000494043 UNC45BQ8IWX7 931 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 ATP6V0D2Q8N8Y2 350 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 FAF2Q96CS3 445 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 BTN2A3PQ96KV6 586 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 FAM161BQ96MY7 647 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 NAP1L3Q99457 506 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-231ENST00000494043 HERPUD2Q9BSE4 406 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 APOL5Q9BWW9 433 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 SLC46A2Q9BY10 475 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 OSBPL2Q9H1P3 480 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 TASP1Q9H6P5 420 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 GKN1Q9NS71 199 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 SMPD4Q9NXE4 827 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 CLEC1BQ9P126 229 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 RCOR3Q9P2K3 495 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-231ENST00000494043 SLC12A6Q9UHW9 1150 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 XPO7Q9UIA9 1087 aaKnown RBP11.81□□□□□ -0.52
MCF2L-231ENST00000494043 ZMYM5Q9UJ78 669 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 EFR3BQ9Y2G0 817 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 CPQQ9Y646 472 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 NOTCH4Q99466 2003 aa11.81□□□□□ -0.52
MCF2L-231ENST00000494043 PRRC2BQ5JSZ5 2229 aaKnown RBP11.8□□□□□ -0.52
MCF2L-231ENST00000494043 DENND4CQ5VZ89 1909 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 FAM72CH0Y354 149 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 H3BRJ5 948 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 EEF2KO00418 725 aaKnown RBP11.8□□□□□ -0.52
MCF2L-231ENST00000494043 IRF1P10914 325 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 KRT10P13645 584 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 GOT1P17174 413 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 IL4RP24394 825 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 CORO1AP31146 461 aaKnown RBP11.8□□□□□ -0.52
MCF2L-231ENST00000494043 ARL4AP40617 200 aa11.8□□□□□ -0.52
MCF2L-231ENST00000494043 HARS2P49590 506 aaKnown RBP11.8□□□□□ -0.52
MCF2L-231ENST00000494043 NRG1Q02297 640 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-231ENST00000494043 ITIH3Q06033 890 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms