RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 KCNU1A8MYU2 1149 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 F5H5T6 163 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 MOCS3O95396 460 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 NFATC1O95644 943 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 TUBB4AP04350 444 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 PSMC3P17980 439 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 MIPP30301 263 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 HDAC4P56524 1084 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 AMPD2Q01433 879 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 OGDHQ02218 1023 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 SCAPQ12770 1279 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 NR1H3Q13133 447 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 ZNF77Q15935 545 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 ZC3H12AQ5D1E8 599 aaKnown RBP15.47■□□□□ 0.07
ACTB-213ENST00000493945 TRNP1Q6NT89 227 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 HTR3DQ70Z44 454 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 BNIPLQ7Z465 357 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 ATP2A3Q93084 1043 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 SLC39A13Q96H72 371 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 FCRL2Q96LA5 508 aaPredicted RBP15.47■□□□□ 0.07
ACTB-213ENST00000493945 SLC22A12Q96S37 553 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 ZWILCHQ9H900 591 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 ARHGEF38Q9NXL2 777 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 CDH22Q9UJ99 828 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 PYCARDQ9ULZ3 195 aa15.47■□□□□ 0.07
ACTB-213ENST00000493945 HEPACAM2A8MVW5 462 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 KIF2AO00139 706 aaPredicted RBP15.46■□□□□ 0.07
ACTB-213ENST00000493945 ACSL4O60488 711 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 PALMO75781 387 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 PRAMEF12O95522 483 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 ADH1CP00326 375 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 COMTP21964 271 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 ARL4AP40617 200 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 ZNF252P-AS1Q0IIN9 211 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 KRT81Q14533 505 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 ADGRF1Q5T601 910 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 ERMARDQ5T6L9 678 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 CHSY1Q86X52 802 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 DENND1CQ8IV53 801 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 MFSD6LQ8IWD5 586 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 ADHFE1Q8IWW8 467 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 CPA6Q8N4T0 437 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 BTBD6Q96KE9 485 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 ZFRQ96KR1 1074 aaKnown RBP15.46■□□□□ 0.07
ACTB-213ENST00000493945 ZSWIM3Q96MP5 696 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 TRMT61BQ9BVS5 477 aaKnown RBP15.46■□□□□ 0.07
ACTB-213ENST00000493945 RETREG1Q9H6L5 497 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 DUS2Q9NX74 493 aaKnown RBP15.46■□□□□ 0.07
ACTB-213ENST00000493945 STIM2Q9P246 746 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 TFR2Q9UP52 801 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 AP4E1Q9UPM8 1137 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 ALG6Q9Y672 507 aa15.46■□□□□ 0.07
ACTB-213ENST00000493945 C2CD4DB7Z1M9 353 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 SP100P23497 879 aaPredicted RBP15.45■□□□□ 0.06
ACTB-213ENST00000493945 ADRA1BP35368 520 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 GJC1P36383 396 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 PFKPQ01813 784 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 EIF4EBP2Q13542 120 aaPredicted RBP15.45■□□□□ 0.06
ACTB-213ENST00000493945 PDK2Q15119 407 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 PREPLQ4J6C6 727 aaPredicted RBP15.45■□□□□ 0.06
ACTB-213ENST00000493945 OTUD1Q5VV17 481 aaPredicted RBP15.45■□□□□ 0.06
ACTB-213ENST00000493945 CPXM2Q8N436 756 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 HJURPQ8NCD3 748 aaPredicted RBP15.45■□□□□ 0.06
ACTB-213ENST00000493945 OSCP1Q8WVF1 389 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 IRF7Q92985 503 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 RBM41Q96IZ5 413 aaKnown RBP15.45■□□□□ 0.06
ACTB-213ENST00000493945 C1orf74Q96LT6 269 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 TRIM7Q9C029 511 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 SMG9Q9H0W8 520 aaKnown RBP15.45■□□□□ 0.06
ACTB-213ENST00000493945 OSBPL2Q9H1P3 480 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 GKN1Q9NS71 199 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 TRIM10Q9UDY6 481 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 PCSK1NQ9UHG2 260 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 DUSP10Q9Y6W6 482 aa15.45■□□□□ 0.06
ACTB-213ENST00000493945 GRID2IPA4D2P6 1211 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 ANHXE9PGG2 379 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 H3BRJ5 948 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 CHADO15335 359 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 PAGE1O75459 146 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 IL9P15248 144 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 KCNQ1P51787 676 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 PITX1P78337 314 aaPredicted RBP15.44■□□□□ 0.06
ACTB-213ENST00000493945 NRG1Q02297 640 aaPredicted RBP15.44■□□□□ 0.06
ACTB-213ENST00000493945 TFF2Q03403 129 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 FCHO2Q0JRZ9 810 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 HTR4Q13639 388 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 MPPE1Q53F39 396 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 Q6ZNB5 142 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 ZSCAN30Q86W11 494 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 VSIG1Q86XK7 387 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 REXO1L1PQ8IX06 675 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 KCTD6Q8NC69 237 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 CSGALNACT1Q8TDX6 532 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 DHX35Q9H5Z1 703 aaKnown RBP15.44■□□□□ 0.06
ACTB-213ENST00000493945 CATSPERBQ9H7T0 1116 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 BRD9Q9H8M2 597 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 PRDM16Q9HAZ2 1276 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.44■□□□□ 0.06
ACTB-213ENST00000493945 RCOR3Q9P2K3 495 aaPredicted RBP15.44■□□□□ 0.06
ACTB-213ENST00000493945 STOML2Q9UJZ1 356 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms