RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 GOLGA8OA6NCC3 632 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 GOLGA8NF8WBI6 632 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PSMD12O00232 456 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PLOD2O00469 737 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 MCF2LO15068 1137 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 ENTPD3O75355 529 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 MAP3K6O95382 1288 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 APOEP02649 317 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 EIF2AK2P19525 551 aaKnown RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 NPTX2P47972 431 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 GRAPQ13588 217 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 CEACAM7Q14002 265 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PIGHQ14442 188 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 ZNF423Q2M1K9 1284 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 MGAT5BQ3V5L5 792 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 SLC9B1Q4ZJI4 515 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 TDRD10Q5VZ19 366 aaKnown RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 KRT80Q6KB66 452 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 DSELQ8IZU8 1212 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 TMEM102Q8N9M5 508 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 GRAPLQ8TC17 118 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 ADAM32Q8TC27 787 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 THAP11Q96EK4 314 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PLEKHA8Q96JA3 519 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 STN1Q9H668 368 aaKnown RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 H3BNH8 94 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 HNRNPDLO14979 420 aaKnown RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 APRTP07741 180 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PRKCHP24723 683 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PSMA2P25787 234 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PRDX6P30041 224 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 YWHABP31946 246 aaKnown RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 GABRB2P47870 512 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 MFSD4BQ5TF39 518 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 UNC5AQ6ZN44 842 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 USP37Q86T82 979 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 SNX32Q86XE0 403 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 UBR7Q8N806 425 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 DDHD1Q8NEL9 900 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 C17orf50Q8WW18 174 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 FBXL18Q96ME1 805 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 DNAJC28Q9NX36 388 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PRR12Q9ULL5 1215 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 MYRFQ9Y2G1 1151 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 CROCCQ5TZA2 2017 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PTPRJQ12913 1337 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 ZC3H11AO75152 810 aaKnown RBP eCLIP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 LRCH4O75427 683 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 ATE1O95260 518 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 AMHP03971 560 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 ENO3P13929 434 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 NFKBIAP25963 317 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 HSPA13P48723 471 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 C21orf59P57076 290 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 MMRN1Q13201 1228 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PCLAFQ15004 111 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 IL23RQ5VWK5 629 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 GPR180Q86V85 440 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 CAND1Q86VP6 1230 aaKnown RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 MAP4K3Q8IVH8 894 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 GPD1LQ8N335 351 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 KCTD6Q8NC69 237 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 MAPK15Q8TD08 544 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 CCDC17Q96LX7 622 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 OR52B2Q96RD2 323 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 SERPINI1Q99574 410 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 MKS1Q9NXB0 559 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 KIAA1522Q9P206 1035 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-210ENST00000493582 NYAP2Q9P242 653 aa12.04□□□□□ -0.48
HDAC4-210ENST00000493582 PRSS51A0A1B0GVH4 220 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 TCRBV5S1A1TA0A578 114 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 J3QRK9 145 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 VNN1O95497 513 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 SERPINE1P05121 402 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 ACADVLP49748 655 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 ACOT2P49753 483 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 EIF2B2P49770 351 aaKnown RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 SLC25A11Q02978 314 aaKnown RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 SPP2Q13103 211 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 ZFP1Q6P2D0 407 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 C16orf87Q6PH81 154 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 BNC2Q6ZN30 1099 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 C15orf39Q6ZRI6 1047 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 MPP5Q8N3R9 675 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 EMC1Q8N766 993 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 KYQ8NBH2 561 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 KCNN1Q92952 543 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 ATP6V1E2Q96A05 226 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 FBXL8Q96CD0 374 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 RMND5BQ96G75 393 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 ST6GALNAC4Q9H4F1 302 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 TJP2Q9UDY2 1190 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 TMEM98Q9Y2Y6 226 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 TMED5Q9Y3A6 229 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 FAM32AQ9Y421 112 aaKnown RBP12.03□□□□□ -0.48
HDAC4-210ENST00000493582 SLC15A5A6NIM6 579 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 WDR64B1ANS9 1081 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 ITGB5P18084 799 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 CD247P20963 164 aa12.03□□□□□ -0.48
HDAC4-210ENST00000493582 OSBPP22059 807 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms