RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 TRMT11Q7Z4G4 463 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 XYLT1Q86Y38 959 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 CAMKK1Q8N5S9 505 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 ZNF557Q8N988 423 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 ADAM32Q8TC27 787 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 DDI1Q8WTU0 396 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 ATRIPQ8WXE1 791 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 BAP1Q92560 729 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 IQCDQ96DY2 449 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 SLC2A11Q9BYW1 496 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 EDEM3Q9BZQ6 932 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 TSPY26PQ9H489 355 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 FAM204AQ9H8W3 233 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 FBXO10Q9UK96 956 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 STAP1Q9ULZ2 295 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 SLC8A2Q9UPR5 921 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 SLC27A6Q9Y2P4 619 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 STARD13Q9Y3M8 1113 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 WDFY4Q6ZS81 3184 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 CACNA1HO95180 2353 aa11.08□□□□□ -0.64
CDC42SE1-206ENST00000492796 CCDC163A0A0D9SF12 145 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 TYW5A2RUC4 315 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 LRRC53A6NM62 1247 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 LILRB5O75023 590 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 GRAP2O75791 330 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 TPM3P06753 285 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 CISD3P0C7P0 127 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 UNGP13051 313 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 MMP8P22894 467 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 HOXD9P28356 352 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 CCR1P32246 355 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 KIR2DL1P43626 348 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 NSFP46459 744 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 SEC13P55735 322 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 GSCP56915 257 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 UBASH3AP57075 661 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 ARID5AQ03989 594 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 MESP2Q0VG99 397 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 E2F5Q15329 346 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 C2orf27AQ580R0 203 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 FAM133BQ5BKY9 247 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 MPP7Q5T2T1 576 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 PPP1R2P3Q6NXS1 205 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 ARCQ7LC44 396 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 LONP2Q86WA8 852 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 CPA5Q8WXQ8 436 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 BHMTQ93088 406 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 NKD2Q969F2 451 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 TMA16Q96EY4 203 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 BTN2A3PQ96KV6 586 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 NUP58Q9BVL2 599 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 TTYH3Q9C0H2 523 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 C2orf42Q9NWW7 574 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 DDIT4Q9NX09 232 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 PLK2Q9NYY3 685 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 SLC12A6Q9UHW9 1150 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 MMP17Q9ULZ9 603 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 R4GN57 208 aa11.07□□□□□ -0.64
CDC42SE1-206ENST00000492796 DMDP11532 3685 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 A0A1W2PQJ5 194 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 CALB1P05937 261 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 CHRM1P11229 460 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 ABCB4P21439 1286 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 CNR2P34972 360 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 TIE1P35590 1138 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 PBX1P40424 430 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 MRE11P49959 708 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 PITX1P78337 314 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 DMC1Q14565 340 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 EIF4HQ15056 248 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 CLEC16AQ2KHT3 1053 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 EOGTQ5NDL2 527 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 PIK3R6Q5UE93 754 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 RNF43Q68DV7 783 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 MMS22LQ6ZRQ5 1243 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 IRF2BP2Q7Z5L9 587 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 ANKS1BQ7Z6G8 1248 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 WDR5BQ86VZ2 330 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 PHF13Q86YI8 300 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 SFTPA1Q8IWL2 248 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 ZNF513Q8N8E2 541 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 ATP6V0D2Q8N8Y2 350 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 IL17RCQ8NAC3 791 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 HJURPQ8NCD3 748 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 NT5C3BQ969T7 300 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 PGAP3Q96FM1 320 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 P2RY11Q96G91 374 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 PHOX2BQ99453 314 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 AGPAT1Q99943 283 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 C11orf70Q9BRQ4 267 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 NUCKS1Q9H1E3 243 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 SEPT11Q9NVA2 429 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 AIPL1Q9NZN9 384 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 PAXBP1Q9Y5B6 917 aa11.06□□□□□ -0.64
CDC42SE1-206ENST00000492796 PRR23AA6NEV1 266 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 KCNU1A8MYU2 1149 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 GOLGA8SH3BPF8 625 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 M0QYT0 321 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms