RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 TSPAN3O60637 253 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 HOXD9P28356 352 aaPredicted RBP28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 MPLP40238 635 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 PDCLQ13371 301 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 EIF4HQ15056 248 aaKnown RBP28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 PLA2G2CQ5R387 149 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 DGLUCYQ7Z3D6 616 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 NETO1Q8TDF5 533 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 IPO4Q8TEX9 1081 aaKnown RBP28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 LHX5Q9H2C1 402 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 POPDC2Q9HBU9 364 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 VPS45Q9NRW7 570 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 CLEC4EQ9ULY5 219 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 TLR6Q9Y2C9 796 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 DCHS1Q96JQ0 3298 aa28.22■■■□□ 2.11
SH3GL3-204ENST00000492099 IRAK2O43187 625 aa28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 TIMM44O43615 452 aa28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 GABRG2P18507 467 aa28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 BPIFB4P59827 614 aa28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 C12orf50Q8NA57 414 aaPredicted RBP28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 RLN3Q8WXF3 142 aa28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 NOX5Q96PH1 765 aa28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 ELOVL2Q9NXB9 296 aa28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 CACNA2D2Q9NY47 1150 aa28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 THAP10Q9P2Z0 257 aaPredicted RBP28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 AJAP1Q9UKB5 411 aaPredicted RBP28.21■■■□□ 2.11
SH3GL3-204ENST00000492099 RALGAPA1Q6GYQ0 2036 aa28.2■■■□□ 2.11
SH3GL3-204ENST00000492099 MAP3K13O43283 966 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 ACSL4O60488 711 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 BCKDHBP21953 392 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 KRT9P35527 623 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 YWHAZP63104 245 aaKnown RBP28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 CREB5Q02930 508 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 MAP7D1Q3KQU3 841 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 MPP7Q5T2T1 576 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 DPY19L2P1Q6NXN4 242 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 FAM71AQ8IYT1 594 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 DDX50Q9BQ39 737 aaKnown RBP28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 RTKNQ9BST9 563 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 CD248Q9HCU0 757 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 STON1Q9Y6Q2 735 aa28.2■■■□□ 2.1
SH3GL3-204ENST00000492099 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 BCLAF3A2AJT9 711 aaKnown RBP28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 CLCN1P35523 988 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 SNX16P57768 344 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 KCNMA1Q12791 1236 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 CCDC6Q16204 474 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 PIK3R6Q5UE93 754 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 KLHDC7AQ5VTJ3 777 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 SYPL2Q5VXT5 272 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 KIAA1211LQ6NV74 962 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 LPCAT2Q7L5N7 544 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 WDTC1Q8N5D0 677 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 PPP1R13BQ96KQ4 1090 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 FCRL2Q96LA5 508 aaPredicted RBP28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 CEP83Q9Y592 693 aa28.19■■■□□ 2.1
SH3GL3-204ENST00000492099 WASH3PC4AMC7 463 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 CAVIN2O95810 425 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 GLI1P08151 1106 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 ATXN1P54253 815 aaKnown RBP28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 ENPP2Q13822 863 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 RAPGEF1Q13905 1077 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 STARD3Q14849 445 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 SF3A2Q15428 464 aaKnown RBP28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 AASDHQ4L235 1098 aaPredicted RBP28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 FAM133BQ5BKY9 247 aaKnown RBP28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 SPDYCQ5MJ68 293 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 SASS6Q6UVJ0 657 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 TAC4Q86UU9 113 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 SLC47A2Q86VL8 602 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 PASD1Q8IV76 773 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 ZNF557Q8N988 423 aaPredicted RBP28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 WFIKKN2Q8TEU8 576 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 SLC39A13Q96H72 371 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 CPXM1Q96SM3 734 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 CIPCQ9C0C6 399 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 CALCOCO1Q9P1Z2 691 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 RAD54BQ9Y620 910 aa28.18■■■□□ 2.1
SH3GL3-204ENST00000492099 ZNF217O75362 1048 aa28.17■■■□□ 2.1
SH3GL3-204ENST00000492099 TPM2P07951 284 aa28.17■■■□□ 2.1
SH3GL3-204ENST00000492099 ARID5AQ03989 594 aa28.17■■■□□ 2.1
SH3GL3-204ENST00000492099 DRAP1Q14919 205 aaPredicted RBP28.17■■■□□ 2.1
SH3GL3-204ENST00000492099 EFHC1Q5JVL4 640 aa28.17■■■□□ 2.1
SH3GL3-204ENST00000492099 RFWD3Q6PCD5 774 aa28.17■■■□□ 2.1
SH3GL3-204ENST00000492099 ADAM32Q8TC27 787 aa28.17■■■□□ 2.1
SH3GL3-204ENST00000492099 ANO10Q9NW15 660 aa28.17■■■□□ 2.1
SH3GL3-204ENST00000492099 ASNSD1Q9NWL6 643 aa28.17■■■□□ 2.1
SH3GL3-204ENST00000492099 GOLGA6L7A0A1B0GV03 622 aa28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 MBD3O95983 291 aa28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 NDUFV2P19404 249 aa28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 HLA-FP30511 346 aa28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 IL12RB1P42701 662 aa28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 DHPSP49366 369 aaPredicted RBP28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 CDKAL1Q5VV42 579 aa28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 SLC36A4Q6YBV0 504 aa28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 DDX51Q8N8A6 666 aaKnown RBP eCLIP28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 LSM14BQ9BX40 385 aaKnown RBP28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 TAB2Q9NYJ8 693 aa28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 TJP2Q9UDY2 1190 aa28.16■■■□□ 2.1
SH3GL3-204ENST00000492099 MBD1Q9UIS9 605 aaPredicted RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms