RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 POLR2FP61218 127 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 CNGA2Q16280 664 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 TSR1Q2NL82 804 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 BTBD8Q5XKL5 378 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 GRAMD4Q6IC98 578 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 PSAPL1Q6NUJ1 521 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 KIAA1211LQ6NV74 962 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 TADA2BQ86TJ2 420 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 ARHGEF19Q8IW93 802 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 SLC4A11Q8NBS3 891 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 PIGKQ92643 395 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 NAP1L5Q96NT1 182 aaPredicted RBP11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 BBS2Q9BXC9 721 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 TRIM5Q9C035 493 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 NUCKS1Q9H1E3 243 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 SLC6A17Q9H1V8 727 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 PDCL3Q9H2J4 239 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 POLMQ9NP87 494 aaPredicted RBP11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 FSCN3Q9NQT6 498 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 FAM207AQ9NSI2 230 aaPredicted RBP11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 DNAJC17Q9NVM6 304 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 PLK2Q9NYY3 685 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 MARK1Q9P0L2 795 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 IFNKQ9P0W0 207 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 RAD54BQ9Y620 910 aa11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 ANKRD11Q6UB99 2663 aaPredicted RBP11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 ASCC3Q8N3C0 2202 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-211ENST00000491685 ZFYVE26Q68DK2 2539 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 TULP2O00295 520 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 ZBTB24O43167 697 aaPredicted RBP11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 KLKB1P03952 638 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 HOXB2P14652 356 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 KRT9P35527 623 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 ATP5C1P36542 298 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 RAD23BP54727 409 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 IRX4P78413 519 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 BYSLQ13895 437 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 DRAP1Q14919 205 aaPredicted RBP11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 C10orf120Q5SQS8 335 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 CCDC186Q7Z3E2 898 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 TRMT11Q7Z4G4 463 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 PGBD3Q8N328 593 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 DEFB119Q8N690 84 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 RBBP8NLQ8NC74 664 aaPredicted RBP11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 NDRG1Q92597 394 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 ANP32BQ92688 251 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 DUSP16Q9BY84 665 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 UBXN6Q9BZV1 441 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 PNPLA8Q9NP80 782 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 CALCOCO1Q9P1Z2 691 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 RASAL2Q9UJF2 1139 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 NAGPAQ9UK23 515 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 CNTN6Q9UQ52 1028 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 USP3Q9Y6I4 520 aa11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 NYNRINQ9P2P1 1898 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-211ENST00000491685 FOXN3O00409 490 aaPredicted RBP11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 KHNYNO15037 678 aaKnown RBP11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 TEX33O43247 280 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 HMBSP08397 361 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 CISD3P0C7P0 127 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 NDUFV2P19404 249 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 DPP6P42658 865 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 NOVA1P51513 510 aaKnown RBP11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 E2F5Q15329 346 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 ARHGAP17Q68EM7 881 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 KLHDC10Q6PID8 442 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 UNQ6494/PRO21346Q6UXR6 183 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 LPCAT2Q7L5N7 544 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 BHLHA9Q7RTU4 235 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 APTXQ7Z2E3 356 aaKnown RBP11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 PIGZQ86VD9 579 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 ANKRD52Q8NB46 1076 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 SHC3Q92529 594 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 SPACA7Q96KW9 195 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 KREMEN1Q96MU8 473 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 CDK5RAP1Q96SZ6 601 aaKnown RBP11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 RBSNQ9H1K0 784 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 SIX2Q9NPC8 291 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 NLRC4Q9NPP4 1024 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 CACNA2D2Q9NY47 1150 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 DNMT3LQ9UJW3 386 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 LSM7Q9UK45 103 aaKnown RBP11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 ZMIZ1Q9ULJ6 1067 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 MYO6Q9UM54 1294 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 SIK3Q9Y2K2 1263 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 STARD13Q9Y3M8 1113 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 CEP83Q9Y592 693 aa11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 FASNP49327 2511 aaKnown RBP11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 TP53BP1Q12888 1972 aaPredicted RBP11.52□□□□□ -0.57
TMEM39A-211ENST00000491685 GON4LQ3T8J9 2241 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 IGHV1OR15-9A0A0B4J2B8 117 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 WASH3PC4AMC7 463 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 THAP12O43422 761 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 ITPKAP23677 461 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 GNA15P30679 374 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 NTSR1P30989 418 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 DGKGP49619 791 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 EFEMP1Q12805 493 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 300.4 ms