RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TRIP4Q15650 581 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-211ENST00000491581 ST3GAL2Q16842 350 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 FAM133BQ5BKY9 247 aaKnown RBP9.3□□□□□ -0.92
HDAC3-211ENST00000491581 FSCBQ5H9T9 825 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 SYPL2Q5VXT5 272 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 CIR1Q86X95 450 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-211ENST00000491581 MARCH9Q86YJ5 346 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 CREBRFQ8IUR6 639 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 SYT12Q8IV01 421 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 SCUBE3Q8IX30 993 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 KIAA1958Q8N8K9 716 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 SLC35F5Q8WV83 523 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 SPACA7Q96KW9 195 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 NT5C1BQ96P26 610 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 IPO9Q96P70 1041 aaKnown RBP9.3□□□□□ -0.92
HDAC3-211ENST00000491581 GPR174Q9BXC1 333 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 SRRTQ9BXP5 876 aaKnown RBP9.3□□□□□ -0.92
HDAC3-211ENST00000491581 INTS2Q9H0H0 1204 aaKnown RBP9.3□□□□□ -0.92
HDAC3-211ENST00000491581 CAAP1Q9H8G2 361 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 TMEM9BQ9NQ34 198 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 ABCB8Q9NUT2 735 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 WASF3Q9UPY6 502 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 FRYQ5TBA9 3013 aa9.3□□□□□ -0.92
HDAC3-211ENST00000491581 ASCC3Q8N3C0 2202 aaKnown RBP9.29□□□□□ -0.92
HDAC3-211ENST00000491581 BECN2A8MW95 431 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 GFRA2O00451 464 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 KCNK3O14649 394 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 EPHX1P07099 455 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 KRT5P13647 590 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 GGCXP38435 758 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 CTSOP43234 321 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-211ENST00000491581 IRAK1P51617 712 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 ZNF132P52740 706 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 RPS24P62847 133 aaKnown RBP9.29□□□□□ -0.92
HDAC3-211ENST00000491581 COG7P83436 770 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 BNC1Q01954 994 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 LRRC63Q05C16 580 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 ENPEPQ07075 957 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 PTPRNQ16849 979 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 LCLAT1Q6UWP7 414 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 CHST9Q7L1S5 443 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 ADIPOR2Q86V24 386 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 PASD1Q8IV76 773 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 TRIM59Q8IWR1 403 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 FAM217AQ8IXS0 508 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 RGL4Q8IZJ4 473 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 SIX6OS1Q8N1H7 587 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 TOE1Q96GM8 510 aaKnown RBP9.29□□□□□ -0.92
HDAC3-211ENST00000491581 DHTKD1Q96HY7 919 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-211ENST00000491581 TIGD1Q96MW7 591 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 NUCKS1Q9H1E3 243 aaKnown RBP9.29□□□□□ -0.92
HDAC3-211ENST00000491581 PRDM16Q9HAZ2 1276 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 SCUBE2Q9NQ36 999 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 PLCB1Q9NQ66 1216 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 ELOVL2Q9NXB9 296 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 THAP10Q9P2Z0 257 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-211ENST00000491581 HESX1Q9UBX0 185 aa9.29□□□□□ -0.92
HDAC3-211ENST00000491581 INTS6Q9UL03 887 aaKnown RBP9.29□□□□□ -0.92
HDAC3-211ENST00000491581 PSMA7O14818 248 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 HYAL3O43820 417 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 STX10O60499 249 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 TBL1XO60907 577 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 LETM1O95202 739 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 MOCS2O96007 188 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 IGLV3-27P01718 113 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 LTFP02788 710 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 ACSL1P33121 698 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 PSEN1P49768 467 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 TPMTP51580 245 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 METAP1P53582 386 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 NUCB2P80303 420 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 ARHGAP44Q17R89 818 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 HSF5Q4G112 596 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 PEAR1Q5VY43 1037 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 SDE2Q6IQ49 451 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 SLC23A3Q6PIS1 610 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 ANKS1BQ7Z6G8 1248 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 TAC4Q86UU9 113 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 TMPRSS6Q8IU80 811 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 IRF2BP1Q8IU81 584 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 CPXM2Q8N436 756 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 ZNF276Q8N554 614 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 ZCCHC9Q8N567 271 aaKnown RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 WDTC1Q8N5D0 677 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 MINDY1Q8N5J2 469 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 PNPLA1Q8N8W4 532 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 EHBP1Q8NDI1 1231 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 DQX1Q8TE96 717 aaKnown RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 RNF139Q8WU17 664 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 KCTD13Q8WZ19 329 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 PLD4Q96BZ4 506 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 FCRL2Q96LA5 508 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 ADAM33Q9BZ11 813 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 GTPBP4Q9BZE4 634 aaKnown RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 UBXN6Q9BZV1 441 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 MIR1-1HGQ9H1L0 117 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 C6orf106Q9H6K1 298 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 CAPN10Q9HC96 672 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 UBE2TQ9NPD8 197 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 ST7Q9NRC1 585 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms