RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 PLK2Q9NYY3 685 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 COX16Q9P0S2 106 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 DEC1Q9P2X7 70 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TMEM59LQ9UK28 342 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 F5P12259 2224 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 M0QYT0 321 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 LAMTOR5O43504 91 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 RNF40O75150 1001 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 KAT7O95251 611 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SLC2A3P11169 496 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 FLT3P36888 993 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 GRIA2P42262 883 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PTPN5P54829 565 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TCF15Q12870 199 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 NME3Q13232 169 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 GAS6Q14393 721 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ANGPT1Q15389 498 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 FAM133BQ5BKY9 247 aaKnown RBP16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 OTUD1Q5VV17 481 aaPredicted RBP16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 GRAMD4Q6IC98 578 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ARCQ7LC44 396 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PHLDB2Q86SQ0 1253 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ATP6V0D2Q8N8Y2 350 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 DDI1Q8WTU0 396 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 RNF34Q969K3 372 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 P2RY11Q96G91 374 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 BTN2A3PQ96KV6 586 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 DDX50Q9BQ39 737 aaKnown RBP16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TAS2R14Q9NYV8 317 aa16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 BZW2Q9Y6E2 419 aaKnown RBP16.91■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 MYOFQ9NZM1 2061 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 GOLGA6L7A0A1B0GV03 622 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 GFRA2O00451 464 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 DDX3XO00571 662 aaKnown RBP eCLIP16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TSPAN3O60637 253 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SERPING1P05155 500 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TPM1P09493 284 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CCR1P32246 355 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 DGKGP49619 791 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CCR3P51677 355 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 MESP2Q0VG99 397 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SLC25A52Q3SY17 297 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 MPPE1Q53F39 396 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 HGSNATQ68CP4 663 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 NADSYN1Q6IA69 706 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TRNP1Q6NT89 227 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 GAS2L3Q86XJ1 694 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 MCOLN2Q8IZK6 566 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SPEM1Q8N4L4 309 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TERB1Q8NA31 727 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 C3orf20Q8ND61 904 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CCDC26Q8TAB7 109 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 NT5C3BQ969T7 300 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PGAP3Q96FM1 320 aaPredicted RBP16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TBCBQ99426 244 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SELENOOQ9BVL4 669 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ADAM33Q9BZ11 813 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 IRX2Q9BZI1 471 aaPredicted RBP16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TRIM5Q9C035 493 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TMEM51Q9NW97 253 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SLC12A6Q9UHW9 1150 aa16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ARIH1Q9Y4X5 557 aaPredicted RBP16.9■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 A0A0A0MRY4 1105 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TMCO5BA8MYB1 307 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 K7EQS6 105 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 AP5Z1O43299 807 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 GJB6O95452 261 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 F9P00740 461 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TFE3P19532 575 aaPredicted RBP16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ABCB4P21439 1286 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 HOXD9P28356 352 aaPredicted RBP16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SLC6A4P31645 630 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SGSHP51688 502 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SEC13P55735 322 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 DEUP1Q05D60 604 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MTA1Q13330 715 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PPP2R5DQ14738 602 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PIK3R6Q5UE93 754 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 DNAJC24Q6P3W2 148 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 RFWD3Q6PCD5 774 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 MAMSTRQ6ZN01 415 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 NUDT18Q6ZVK8 323 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SND1Q7KZF4 910 aaKnown RBP eCLIP16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 SFTPA1Q8IWL2 248 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 EMC1Q8N766 993 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TMA16Q96EY4 203 aaKnown RBP16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CFAP57Q96MR6 1250 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PRMT8Q9NR22 394 aaPredicted RBP16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 PIGVQ9NUD9 493 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CALCOCO1Q9P1Z2 691 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 XPO7Q9UIA9 1087 aaKnown RBP16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 FBXO10Q9UK96 956 aa16.89■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TYW5A2RUC4 315 aaKnown RBP16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TBC1D3BA6NDS4 549 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 KCNU1A8MYU2 1149 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 CHURC1-FNTBB4DL54 471 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 H0Y858 1186 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 TRIM24O15164 1050 aa16.88■□□□□ 0.29
MSH5-SAPCD1-206ENST00000491552 ATG13O75143 517 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms