RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SERPINA13PQ6UXR4 307 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 SFTPA1Q8IWL2 248 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 ZNF606Q8WXB4 792 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 NDRG1Q92597 394 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 PRCCQ92733 491 aaPredicted RBP17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 KAT5Q92993 513 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 CRACR2AQ9BSW2 395 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 SYNCQ9H7C4 482 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 PRDM16Q9HAZ2 1276 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 TMEM9BQ9NQ34 198 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 CALCOCO1Q9P1Z2 691 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 APEX2Q9UBZ4 518 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 SUSD2Q9UGT4 822 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 CNTN6Q9UQ52 1028 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 PIK3R2O00459 728 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 TSPAN3O60637 253 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 MOCS3O95396 460 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 EPHX1P07099 455 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 SLC2A3P11169 496 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 ST8SIA6P61647 398 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 GFPT1Q06210 699 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 NNTQ13423 1086 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 MAN2A1Q16706 1144 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 ARHGAP44Q17R89 818 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 MAP7D1Q3KQU3 841 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 WDR45BQ5MNZ6 344 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 TRIM65Q6PJ69 517 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 BEND5Q7L4P6 421 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 ARMCX6Q7L4S7 300 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 SCUBE3Q8IX30 993 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 FAM217AQ8IXS0 508 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 RGL4Q8IZJ4 473 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 AHI1Q8N157 1196 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 HJURPQ8NCD3 748 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 PPP1R9BQ96SB3 815 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 FBRSQ9HAH7 460 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 TMEM51Q9NW97 253 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 THAP10Q9P2Z0 257 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 TJP2Q9UDY2 1190 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 EVLQ9UI08 416 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 STOML2Q9UJZ1 356 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 TLR6Q9Y2C9 796 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 USP34Q70CQ2 3546 aa17.24■□□□□ 0.35
PDLIM2-217ENST00000491330 A0A1W2PQF6 199 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 ACSL4O60488 711 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 CFIP05156 583 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 POLR2EP19388 210 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 BCKDHBP21953 392 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 GPD2P43304 727 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 YWHAZP63104 245 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 ZNF33AQ06730 810 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 DUOXA1Q1HG43 343 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 FNDC3BQ53EP0 1204 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 TRIM61Q5EBN2 209 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 EFHC1Q5JVL4 640 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 LRSAM1Q6UWE0 723 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 RBM43Q6ZSC3 357 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 METTL3Q86U44 580 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 RNF34Q969K3 372 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 SIPA1Q96FS4 1042 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 PIWIL1Q96J94 861 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 ACOX2Q99424 681 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 POPDC2Q9HBU9 364 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 SUN2Q9UH99 717 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 CYP8B1Q9UNU6 501 aa17.23■□□□□ 0.35
PDLIM2-217ENST00000491330 MED19A0JLT2 244 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 MSI1O43347 362 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 TBL1XO60907 577 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 SYPP08247 313 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 NDUFV2P19404 249 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 CDK17Q00537 523 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 GEN1Q17RS7 908 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 MFN1Q8IWA4 741 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 HDDC3Q8N4P3 179 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 ATP6V0D2Q8N8Y2 350 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 MSANTD4Q8NCY6 345 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 ANKRD20A12PQ8NF67 263 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 MRGPRX1Q96LB2 322 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 KREMEN1Q96MU8 473 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 SLC32A1Q9H598 525 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 GGA2Q9UJY4 613 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 SLC6A14Q9UN76 642 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 MYO16Q9Y6X6 1858 aa17.22■□□□□ 0.35
PDLIM2-217ENST00000491330 RNASEH1O60930 286 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 GLI1P08151 1106 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 PABPC1P11940 636 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 SLC9A1P19634 815 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 ABCB4P21439 1286 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 CD6P30203 668 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 RDXP35241 583 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 NNMTP40261 264 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 OXCT1P55809 520 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 CDH18Q13634 790 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 ZNF234Q14588 700 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 VWA3BQ502W6 1294 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 RNF219Q5W0B1 726 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 CHST9Q7L1S5 443 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 BHLHA9Q7RTU4 235 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 TMEM110Q86TL2 294 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 TMPRSS6Q8IU80 811 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms